FFCP PHASE1:Hg19::chr15:51973635..51973646,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29106 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13707 | |||
|TSSclassifier=strong | |||
|UniProt=F5H3R8 | |||
|association_with_transcript=-42bp_to_ENST00000542355_5end | |||
|coexpression_cluster_id=C1379 | |||
|description=CAGE_peak_4_at_SCG3_5end | |||
|id=chr15:51973635..51973646,+ | |||
|ontology_enrichment_celltype=CL:0000047!6.72e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.24e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.93e-23;82!UBERON:0006215;1.19e-09;3!UBERON:0006241;4.36e-08;3!UBERON:0003057;4.36e-08;3 | |||
|ontology_enrichment_disease=DOID:5409!6.45e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:169;7.86e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.43e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001017!7.43e-70!82;UBERON:0000073!1.36e-68!94;UBERON:0001016!1.36e-68!94;UBERON:0005743!5.48e-68!86;UBERON:0001049!3.72e-67!57;UBERON:0005068!3.72e-67!57;UBERON:0006241!3.72e-67!57;UBERON:0007135!3.72e-67!57;UBERON:0000955!1.17e-56!69;UBERON:0006238!1.17e-56!69;UBERON:0002616!4.15e-56!59;UBERON:0002780!3.66e-54!41;UBERON:0001890!3.66e-54!41;UBERON:0006240!3.66e-54!41;UBERON:0003080!1.39e-52!42;UBERON:0002346!6.40e-51!90;UBERON:0003075!2.72e-50!86;UBERON:0007284!2.72e-50!86;UBERON:0002020!2.43e-43!34;UBERON:0003528!2.43e-43!34;UBERON:0001893!3.70e-43!34;UBERON:0002791!1.52e-41!33;UBERON:0001869!2.24e-40!32;UBERON:0007023!1.81e-38!115;UBERON:0003056!4.13e-38!61;UBERON:0000924!5.08e-36!173;UBERON:0006601!5.08e-36!173;UBERON:0004121!5.47e-35!169;UBERON:0002619!6.19e-35!22;UBERON:0001950!9.73e-32!20;UBERON:0000153!6.22e-31!129;UBERON:0007811!6.22e-31!129;UBERON:0000033!7.56e-31!123;UBERON:0000956!5.28e-30!25;UBERON:0000203!5.28e-30!25;UBERON:0003076!3.82e-15!15;UBERON:0003057!3.82e-15!15;UBERON:0002420!8.20e-15!9;UBERON:0007245!8.20e-15!9;UBERON:0010009!8.20e-15!9;UBERON:0010011!8.20e-15!9;UBERON:0000454!8.20e-15!9;UBERON:0002308!8.90e-15!9;UBERON:0000125!8.90e-15!9;UBERON:0000025!6.08e-13!194;UBERON:0001894!2.69e-12!7;UBERON:0006222!2.69e-12!7;UBERON:0009663!1.20e-11!7;UBERON:0000200!2.09e-11!6;UBERON:0004733!3.45e-11!12;UBERON:0002028!3.45e-11!12;UBERON:0007277!3.45e-11!12;UBERON:0001871!5.46e-11!7;UBERON:0002298!2.83e-10!8;UBERON:0004732!3.74e-10!13;UBERON:0002021!5.20e-10!5;UBERON:0004111!1.98e-09!241;UBERON:0000349!2.07e-09!5;UBERON:0001872!2.10e-09!5;UBERON:0000064!5.33e-09!219;UBERON:0003296!4.33e-08!4;UBERON:0010133!4.33e-08!4;UBERON:0000369!1.77e-07!4;UBERON:0002435!1.77e-07!4;UBERON:0000204!1.77e-07!4;UBERON:0010082!1.77e-07!4;UBERON:0000922!1.88e-07!612;UBERON:0002680!2.53e-07!9;UBERON:0001895!2.53e-07!9;UBERON:0010092!2.53e-07!9;UBERON:0000475!3.26e-07!365;UBERON:0000062!8.06e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.61e-60;41!UBERON:0001890;4.61e-60;41!UBERON:0000073;1.95e-57;53!UBERON:0002616;1.95e-57;53!UBERON:0001893;5.39e-57;34!UBERON:0003528;6.72e-57;34!UBERON:0002020;6.72e-57;34!UBERON:0001869;3.40e-56;32!UBERON:0002791;5.59e-56;32!UBERON:0002619;6.27e-54;22!UBERON:0001950;6.32e-49;20!UBERON:0000956;6.08e-47;25!UBERON:0000203;6.08e-47;25!UBERON:0000955;1.15e-40;68!UBERON:0001017;1.33e-39;75!UBERON:0001016;2.97e-36;83!UBERON:0002420;3.12e-22;9!UBERON:0000125;3.12e-22;9!UBERON:0007245;3.12e-22;9!UBERON:0002308;3.12e-22;9!UBERON:0010009;3.12e-22;9!UBERON:0010011;3.12e-22;9!UBERON:0000454;3.12e-22;9!UBERON:0001894;2.81e-18;7!UBERON:0009663;2.55e-17;7!UBERON:0004733;3.34e-17;12!UBERON:0002028;3.34e-17;12!UBERON:0000200;7.43e-17;6!UBERON:0004732;9.88e-16;13!UBERON:0002298;1.16e-15;6!UBERON:0011216;1.04e-14;132!UBERON:0002021;1.10e-14;5!UBERON:0007023;1.79e-14;114!UBERON:0001871;7.57e-14;6!UBERON:0001872;8.79e-14;5!UBERON:0000349;8.79e-14;5!UBERON:0003296;1.00e-11;4!UBERON:0010133;1.00e-11;4!UBERON:0002784;2.54e-11;4!UBERON:0002680;3.91e-11;9!UBERON:0001895;3.91e-11;9!UBERON:0000369;7.71e-11;4!UBERON:0002435;7.71e-11;4!UBERON:0000204;7.71e-11;4!UBERON:0001870;1.89e-09;3!UBERON:0000988;3.47e-09;3!UBERON:0005383;1.42e-08;3!UBERON:0005382;1.42e-08;3!UBERON:0010314;2.07e-08;132!UBERON:0001896;3.51e-08;3!UBERON:0005290;3.51e-08;3!UBERON:0002240;4.36e-08;3!UBERON:0005174;4.36e-08;3!UBERON:0001137;4.36e-08;3!UBERON:0001905;3.17e-07;2!UBERON:0002757;3.17e-07;2!UBERON:0010134;3.17e-07;2!UBERON:0005408;3.17e-07;2!UBERON:0001899;3.17e-07;2!UBERON:0002702;5.71e-07;2!UBERON:0002771;9.48e-07;2 | |||
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|short_description=p4@SCG3 | |||
}} |
Revision as of 23:34, 11 January 2014
Short description: | p4@SCG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCG3_5end |
Coexpression cluster: | C1379_pineal_cerebellum_small_occipital_parietal_temporal_hippocampus |
Association with transcript: | -42bp_to_ENST00000542355_5end |
EntrezGene: | SCG3 |
HGNC: | 13707 |
UniProt: | F5H3R8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.24e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.43e-07 | 6 |