FFCP PHASE1:Hg19::chr4:159131630..159131647,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:159131630..159131647,+
|short_description=p1@TMEM144
|description=CAGE_peak_1_at_TMEM144_5end
|association_with_transcript=0bp_to_ENST00000503200,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55314 | |EntrezGene=55314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25633 | |HGNC=25633 | ||
|TSSclassifier=strong | |||
|UniProt=D6RDF9,D6R9I0,D6RIX5 | |UniProt=D6RDF9,D6R9I0,D6RIX5 | ||
|association_with_transcript=0bp_to_ENST00000503200,ENST00000504569,ENST00000509278,ENST00000513744,ENST00000514346,ENST00000514558_5end | |||
|cluster_id=chr4:159131630..159131647,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_TMEM144_5end | |||
|id=chr4:159131630..159131647,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.36e-11!63;CL:0000576!1.36e-11!63;CL:0000040!1.36e-11!63;CL:0000559!1.36e-11!63;CL:0002009!2.09e-11!65;CL:0000557!6.67e-10!71;CL:0000839!1.08e-09!70;CL:0000766!7.06e-08!76;CL:0000860!7.41e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000235;9.93e-11;6!CL:0000473;1.34e-10;39!CL:0000234;1.34e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.72e-13,59;CL:0000576,3.72e-13,59;CL:0000040,3.72e-13,59;CL:0000559,3.72e-13,59;CL:0002009,1.64e-12,61;CL:0000839,4.42e-11,66;CL:0000557,8.04e-11,67;CL:0000235,1.00e-10,6;CL:0000766,1.23e-09,72;CL:0000473,1.35e-09,48;CL:0000234,1.35e-09,48 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.90e-13;82!UBERON:0006241;3.06e-07;3!UBERON:0003057;3.06e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;4.96e-38;34!UBERON:0003528;2.42e-37;34!UBERON:0002020;2.42e-37;34!UBERON:0002791;1.49e-36;32!UBERON:0001869;1.96e-36;32!UBERON:0002780;9.48e-34;41!UBERON:0001890;9.48e-34;41!UBERON:0002619;3.18e-32;22!UBERON:0000073;3.57e-32;53!UBERON:0002616;3.57e-32;53!UBERON:0001950;1.29e-28;20!UBERON:0000956;9.17e-28;25!UBERON:0000203;9.17e-28;25!UBERON:0001017;1.47e-22;75!UBERON:0000955;7.16e-22;68!UBERON:0000125;5.12e-19;9!UBERON:0002308;5.12e-19;9!UBERON:0001016;7.74e-19;83!UBERON:0002420;1.31e-18;9!UBERON:0007245;1.31e-18;9!UBERON:0010009;1.31e-18;9!UBERON:0010011;1.31e-18;9!UBERON:0000454;1.31e-18;9!UBERON:0004732;3.29e-15;13!UBERON:0009663;4.57e-15;7!UBERON:0002298;1.70e-13;6!UBERON:0004733;2.59e-13;12!UBERON:0002028;2.59e-13;12!UBERON:0000200;1.84e-12;6!UBERON:0007023;1.12e-11;114!UBERON:0000349;9.63e-11;5!UBERON:0001871;2.60e-10;6!UBERON:0011216;1.38e-09;132!UBERON:0000369;6.52e-09;4!UBERON:0002435;6.52e-09;4!UBERON:0000204;6.52e-09;4!UBERON:0002680;4.29e-08;9!UBERON:0001895;4.29e-08;9!UBERON:0000988;1.30e-07;3!UBERON:0001896;1.51e-07;3!UBERON:0005290;1.51e-07;3!UBERON:0001872;2.95e-07;5!UBERON:0002240;3.06e-07;3!UBERON:0005174;3.06e-07;3!UBERON:0001137;3.06e-07;3!UBERON:0002021;3.20e-07;5!UBERON:0001870;3.83e-07;3!UBERON:0005383;5.04e-07;3!UBERON:0005382;5.04e-07;3 | |||
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| ||
|short_description=p1@TMEM144 | |||
}} | }} |
Latest revision as of 10:32, 16 September 2015
Short description: | p1@TMEM144 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM144_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000503200, ENST00000504569, ENST00000509278, ENST00000513744, ENST00000514346, ENST00000514558_5end |
EntrezGene: | TMEM144 |
HGNC: | 25633 |
UniProt: | D6RDF9D6R9I0D6RIX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.72e-13 | 59 |
monocyte | 3.72e-13 | 59 |
monoblast | 3.72e-13 | 59 |
promonocyte | 3.72e-13 | 59 |
macrophage dendritic cell progenitor | 1.64e-12 | 61 |
myeloid lineage restricted progenitor cell | 4.42e-11 | 66 |
granulocyte monocyte progenitor cell | 8.04e-11 | 67 |
macrophage | 1.00e-10 | 6 |
myeloid leukocyte | 1.23e-09 | 72 |
defensive cell | 1.35e-09 | 48 |
phagocyte | 1.35e-09 | 48 |