FFCP PHASE1:Hg19::chr3:47933982..47934047,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:47933982..47934047,- to FFCP PHASE1:Hg19::chr3:47933982..47934047,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4134 | |EntrezGene=4134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6862 | |HGNC=6862 | ||
|TSSclassifier=strong | |||
|UniProt=P27816 | |UniProt=P27816 | ||
|association_with_transcript=17bp_to_ENST00000497735,uc003cse.1,uc011bbe.1_5end | |||
|cluster_id=chr3:47933982..47934047,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_MAP4_5end | |||
|id=chr3:47933982..47934047,- | |||
|ontology_enrichment_celltype=CL:0000047!3.95e-10!8;CL:0000540!4.16e-07!6;CL:0000031!4.16e-07!6;CL:0000404!4.16e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000047;9.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.22e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.03e-24;82!UBERON:0006215;3.52e-10;3!UBERON:0006241;5.44e-09;3!UBERON:0003057;5.44e-09;3!UBERON:0010122;3.18e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.22e-87!82;UBERON:0005743!1.61e-85!86;UBERON:0001049!1.67e-85!57;UBERON:0005068!1.67e-85!57;UBERON:0006241!1.67e-85!57;UBERON:0007135!1.67e-85!57;UBERON:0000073!4.17e-78!94;UBERON:0001016!4.17e-78!94;UBERON:0002616!2.08e-72!59;UBERON:0003075!2.12e-71!86;UBERON:0007284!2.12e-71!86;UBERON:0000955!1.10e-69!69;UBERON:0006238!1.10e-69!69;UBERON:0002780!6.31e-69!41;UBERON:0001890!6.31e-69!41;UBERON:0006240!6.31e-69!41;UBERON:0002346!2.24e-67!90;UBERON:0003080!5.45e-67!42;UBERON:0001893!5.54e-57!34;UBERON:0002020!8.86e-57!34;UBERON:0003528!8.86e-57!34;UBERON:0002791!4.33e-55!33;UBERON:0001869!7.80e-54!32;UBERON:0003056!1.11e-53!61;UBERON:0007023!1.96e-52!115;UBERON:0000956!1.51e-41!25;UBERON:0000203!1.51e-41!25;UBERON:0004121!3.63e-41!169;UBERON:0000924!9.90e-40!173;UBERON:0006601!9.90e-40!173;UBERON:0000033!2.38e-39!123;UBERON:0000153!5.07e-38!129;UBERON:0007811!5.07e-38!129;UBERON:0002619!1.67e-37!22;UBERON:0001950!6.87e-34!20;UBERON:0000025!5.97e-21!194;UBERON:0003076!9.10e-19!15;UBERON:0003057!9.10e-19!15;UBERON:0002308!2.31e-16!9;UBERON:0000125!2.31e-16!9;UBERON:0002420!2.57e-16!9;UBERON:0007245!2.57e-16!9;UBERON:0010009!2.57e-16!9;UBERON:0010011!2.57e-16!9;UBERON:0000454!2.57e-16!9;UBERON:0004732!9.65e-16!13;UBERON:0004733!2.44e-14!12;UBERON:0002028!2.44e-14!12;UBERON:0007277!2.44e-14!12;UBERON:0004111!4.07e-14!241;UBERON:0009663!3.54e-13!7;UBERON:0001894!5.57e-13!7;UBERON:0006222!5.57e-13!7;UBERON:0000483!9.98e-13!309;UBERON:0000119!2.01e-12!312;UBERON:0000064!3.59e-12!219;UBERON:0000477!5.18e-12!286;UBERON:0000200!7.60e-12!6;UBERON:0001871!1.96e-11!7;UBERON:0002298!6.40e-11!8;UBERON:0002021!1.84e-10!5;UBERON:0000349!3.06e-10!5;UBERON:0001872!3.30e-10!5;UBERON:0002680!8.83e-10!9;UBERON:0001895!8.83e-10!9;UBERON:0010092!8.83e-10!9;UBERON:0000369!1.04e-08!4;UBERON:0002435!1.04e-08!4;UBERON:0000204!1.04e-08!4;UBERON:0010082!1.04e-08!4;UBERON:0000475!1.34e-08!365;UBERON:0003296!4.63e-08!4;UBERON:0010133!4.63e-08!4;UBERON:0000481!4.24e-07!347;UBERON:0005383!7.89e-07!3;UBERON:0005382!7.89e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.94e-71;41!UBERON:0001890;3.94e-71;41!UBERON:0001893;2.22e-69;34!UBERON:0003528;1.14e-68;34!UBERON:0002020;1.14e-68;34!UBERON:0000073;2.93e-68;53!UBERON:0002616;2.93e-68;53!UBERON:0001869;3.58e-68;32!UBERON:0002791;9.32e-68;32!UBERON:0002619;4.56e-60;22!UBERON:0000956;4.42e-57;25!UBERON:0000203;4.42e-57;25!UBERON:0001950;3.33e-54;20!UBERON:0000955;1.35e-45;68!UBERON:0001017;1.76e-45;75!UBERON:0001016;1.20e-39;83!UBERON:0000125;1.95e-25;9!UBERON:0002308;1.95e-25;9!UBERON:0002420;2.30e-25;9!UBERON:0007245;2.30e-25;9!UBERON:0010009;2.30e-25;9!UBERON:0010011;2.30e-25;9!UBERON:0000454;2.30e-25;9!UBERON:0004732;5.42e-21;13!UBERON:0009663;2.77e-20;7!UBERON:0001894;5.86e-20;7!UBERON:0004733;8.87e-19;12!UBERON:0002028;8.87e-19;12!UBERON:0007023;2.13e-18;114!UBERON:0000200;3.99e-18;6!UBERON:0002298;3.45e-17;6!UBERON:0002021;6.33e-16;5!UBERON:0000349;1.53e-15;5!UBERON:0001872;1.67e-15;5!UBERON:0001871;3.67e-15;6!UBERON:0011216;4.30e-14;132!UBERON:0000369;4.37e-13;4!UBERON:0002435;4.37e-13;4!UBERON:0000204;4.37e-13;4!UBERON:0002784;1.45e-12;4!UBERON:0003296;4.86e-12;4!UBERON:0010133;4.86e-12;4!UBERON:0002680;1.00e-11;9!UBERON:0001895;1.00e-11;9!UBERON:0010314;5.59e-11;132!UBERON:0005383;4.42e-10;3!UBERON:0005382;4.42e-10;3!UBERON:0001870;9.00e-10;3!UBERON:0000988;1.71e-09;3!UBERON:0001896;2.13e-09;3!UBERON:0005290;2.13e-09;3!UBERON:0002240;5.44e-09;3!UBERON:0005174;5.44e-09;3!UBERON:0001137;5.44e-09;3!UBERON:0001905;1.71e-07;2!UBERON:0002757;1.71e-07;2!UBERON:0010134;1.71e-07;2!UBERON:0005408;1.71e-07;2!UBERON:0001899;1.71e-07;2!UBERON:0001954;1.88e-07;2!UBERON:0003022;1.88e-07;2!UBERON:0002421;1.88e-07;2!UBERON:0002600;1.88e-07;2!UBERON:0001873;3.18e-07;2!UBERON:0002771;5.59e-07;2!UBERON:0002148;7.76e-07;2!UBERON:0006331;7.76e-07;2!UBERON:0009662;7.76e-07;2!UBERON:0002702;8.12e-07;2!UBERON:0001876;9.13e-07;2!UBERON:0001897;9.55e-07;2!UBERON:0010225;9.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.64e-127,56;UBERON:0005068,5.64e-127,56;UBERON:0006241,5.64e-127,56;UBERON:0007135,5.64e-127,56;UBERON:0001017,8.32e-123,81;UBERON:0000073,4.99e-119,53;UBERON:0002616,4.99e-119,53;UBERON:0001016,3.34e-113,89;UBERON:0000955,4.13e-102,68;UBERON:0006238,4.13e-102,68;UBERON:0002780,4.32e-101,41;UBERON:0001890,4.32e-101,41;UBERON:0003080,4.32e-101,41;UBERON:0006240,4.32e-101,41;UBERON:0003075,1.42e-90,82;UBERON:0007284,1.42e-90,82;UBERON:0002346,8.20e-86,86;UBERON:0001893,7.79e-82,34;UBERON:0003528,1.60e-81,34;UBERON:0002020,1.60e-81,34;UBERON:0001869,9.55e-77,32;UBERON:0002791,3.79e-76,32;UBERON:0003056,1.70e-72,61;UBERON:0010371,7.14e-69,104;UBERON:0002619,4.84e-60,22;UBERON:0007023,6.72e-60,114;UBERON:0000956,4.73e-57,25;UBERON:0000203,4.73e-57,25;UBERON:0010314,3.69e-56,132;UBERON:0004121,1.39e-55,171;UBERON:0000924,1.39e-55,171;UBERON:0006601,1.39e-55,171;UBERON:0001950,3.58e-54,20;UBERON:0011216,6.93e-41,223;UBERON:0000025,1.51e-28,192;UBERON:0003076,9.36e-26,15;UBERON:0003057,9.36e-26,15;UBERON:0000125,1.90e-25,9;UBERON:0002308,1.90e-25,9;UBERON:0002420,2.26e-25,9;UBERON:0007245,2.26e-25,9;UBERON:0010009,2.26e-25,9;UBERON:0010011,2.26e-25,9;UBERON:0000454,2.26e-25,9;UBERON:0004732,5.67e-21,13;UBERON:0004111,2.30e-20,240;UBERON:0009663,2.69e-20,7;UBERON:0001894,5.61e-20,7;UBERON:0006222,5.61e-20,7;UBERON:0004733,9.26e-19,12;UBERON:0002028,9.26e-19,12;UBERON:0007277,9.26e-19,12;UBERON:0000200,3.82e-18,6;UBERON:0002298,3.50e-17,6;UBERON:0002021,6.52e-16,5;UBERON:0000349,1.48e-15,5;UBERON:0001872,1.67e-15,5;UBERON:0001871,3.76e-15,6;UBERON:0000483,4.52e-15,306;UBERON:0000119,8.37e-15,309;UBERON:0000369,4.37e-13,4;UBERON:0002435,4.37e-13,4;UBERON:0000204,4.37e-13,4;UBERON:0010082,4.37e-13,4;UBERON:0002784,1.38e-12,4;UBERON:0003296,4.79e-12,4;UBERON:0010133,4.79e-12,4;UBERON:0002680,1.03e-11,9;UBERON:0001895,1.03e-11,9;UBERON:0010092,1.03e-11,9;UBERON:0005383,4.56e-10,3;UBERON:0005382,4.56e-10,3;UBERON:0001870,9.14e-10,3;UBERON:0000988,1.71e-09,3;UBERON:0001896,2.16e-09,3;UBERON:0005290,2.16e-09,3;UBERON:0010096,2.16e-09,3;UBERON:0002240,5.60e-09,3;UBERON:0005174,5.60e-09,3;UBERON:0001137,5.60e-09,3;UBERON:0000922,1.51e-08,592;UBERON:0000923,1.53e-08,560;UBERON:0010316,1.53e-08,560;UBERON:0005291,1.53e-08,560;UBERON:0006598,1.53e-08,560;UBERON:0010317,1.53e-08,560;UBERON:0002532,1.53e-08,560;UBERON:0002050,2.22e-08,564;UBERON:0005423,1.03e-07,581;UBERON:0001905,1.69e-07,2;UBERON:0002757,1.69e-07,2;UBERON:0010134,1.69e-07,2;UBERON:0005408,1.69e-07,2;UBERON:0001899,1.69e-07,2;UBERON:0001954,1.85e-07,2;UBERON:0003022,1.85e-07,2;UBERON:0002421,1.85e-07,2;UBERON:0002600,1.85e-07,2;UBERON:0001873,3.23e-07,2;UBERON:0010122,3.23e-07,2;UBERON:0002771,5.59e-07,2;UBERON:0002148,7.76e-07,2;UBERON:0006331,7.76e-07,2;UBERON:0009662,7.76e-07,2;UBERON:0002702,8.00e-07,2;UBERON:0001876,9.27e-07,2;UBERON:0001897,9.27e-07,2;UBERON:0010225,9.27e-07,2 | |||
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| ||
|short_description=p3@MAP4 | |||
}} | }} |
Latest revision as of 13:15, 18 September 2015
Short description: | p3@MAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAP4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 17bp_to_ENST00000497735, uc003cse.1, uc011bbe.1_5end |
EntrezGene: | MAP4 |
HGNC: | 6862 |
UniProt: | P27816 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.22e-08 | 8 |