FFCP PHASE1:Hg19::chr7:4998802..4998861,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221938 | |EntrezGene=221938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30133 | |HGNC=30133 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IY49,B5MBW4 | |UniProt=Q8IY49,B5MBW4 | ||
|association_with_transcript=0bp_to_ENST00000401401,ENST00000404774,ENST00000406755,NM_001100600,NM_198403,uc003snl.1,uc003snn.3,uc003sno.3,uc010ksq.2_5end | |association_with_transcript=0bp_to_ENST00000401401,ENST00000404774,ENST00000406755,NM_001100600,NM_198403,uc003snl.1,uc003snn.3,uc003sno.3,uc010ksq.2_5end | ||
|cluster_id=chr7:4998802..4998861,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_MMD2_5end | |description=CAGE_peak_1_at_MMD2_5end | ||
|id=chr7:4998802..4998861,- | |id=chr7:4998802..4998861,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.80e-27;82!UBERON:0006241;2.47e-10;3!UBERON:0003057;2.47e-10;3!UBERON:0003056;2.65e-09;3!UBERON:0006215;4.78e-09;3!UBERON:0010122;2.45e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.70e-92!57;UBERON:0005068!2.70e-92!57;UBERON:0006241!2.70e-92!57;UBERON:0007135!2.70e-92!57;UBERON:0001017!1.13e-81!82;UBERON:0005743!4.77e-80!86;UBERON:0000955!1.36e-78!69;UBERON:0006238!1.36e-78!69;UBERON:0002616!3.73e-77!59;UBERON:0000073!1.48e-76!94;UBERON:0001016!1.48e-76!94;UBERON:0002780!1.96e-74!41;UBERON:0001890!1.96e-74!41;UBERON:0006240!1.96e-74!41;UBERON:0003080!2.07e-72!42;UBERON:0003075!9.93e-72!86;UBERON:0007284!9.93e-72!86;UBERON:0002346!7.74e-68!90;UBERON:0007023!4.93e-65!115;UBERON:0002020!1.75e-60!34;UBERON:0003528!1.75e-60!34;UBERON:0001893!3.96e-60!34;UBERON:0002791!5.14e-58!33;UBERON:0001869!2.81e-56!32;UBERON:0003056!9.25e-52!61;UBERON:0002619!9.00e-44!22;UBERON:0000033!2.04e-41!123;UBERON:0000956!2.45e-41!25;UBERON:0000203!2.45e-41!25;UBERON:0001950!2.69e-39!20;UBERON:0000153!8.72e-39!129;UBERON:0007811!8.72e-39!129;UBERON:0004121!2.89e-38!169;UBERON:0000924!5.44e-37!173;UBERON:0006601!5.44e-37!173;UBERON:0000025!9.61e-24!194;UBERON:0002308!1.68e-20!9;UBERON:0000125!1.68e-20!9;UBERON:0002420!2.94e-20!9;UBERON:0007245!2.94e-20!9;UBERON:0010009!2.94e-20!9;UBERON:0010011!2.94e-20!9;UBERON:0000454!2.94e-20!9;UBERON:0003076!4.98e-20!15;UBERON:0003057!4.98e-20!15;UBERON:0004111!6.95e-17!241;UBERON:0009663!3.63e-16!7;UBERON:0004732!5.14e-16!13;UBERON:0001894!2.49e-15!7;UBERON:0006222!2.49e-15!7;UBERON:0000483!1.63e-14!309;UBERON:0000119!3.25e-14!312;UBERON:0004733!4.55e-14!12;UBERON:0002028!4.55e-14!12;UBERON:0007277!4.55e-14!12;UBERON:0000477!6.14e-14!286;UBERON:0002298!1.23e-13!8;UBERON:0001871!2.10e-13!7;UBERON:0000200!2.22e-13!6;UBERON:0000064!9.70e-13!219;UBERON:0000062!1.72e-12!511;UBERON:0000349!1.84e-12!5;UBERON:0001872!1.12e-11!5;UBERON:0002021!1.36e-11!5;UBERON:0000475!4.36e-11!365;UBERON:0000369!2.14e-10!4;UBERON:0002435!2.14e-10!4;UBERON:0000204!2.14e-10!4;UBERON:0010082!2.14e-10!4;UBERON:0000481!5.64e-10!347;UBERON:0000922!1.17e-09!612;UBERON:0003296!2.04e-09!4;UBERON:0010133!2.04e-09!4;UBERON:0000923!6.27e-09!604;UBERON:0005291!6.27e-09!604;UBERON:0006598!6.27e-09!604;UBERON:0002532!6.27e-09!604;UBERON:0002050!7.03e-09!605;UBERON:0005423!7.03e-09!605;UBERON:0002680!1.11e-08!9;UBERON:0001895!1.11e-08!9;UBERON:0010092!1.11e-08!9;UBERON:0000467!1.79e-08!625;UBERON:0000480!2.00e-08!626;UBERON:0005383!3.85e-08!3;UBERON:0005382!3.85e-08!3;UBERON:0002240!4.32e-08!3;UBERON:0000988!5.44e-08!3;UBERON:0006331!8.38e-08!3;UBERON:0001896!1.15e-07!3;UBERON:0005290!1.15e-07!3;UBERON:0010096!1.15e-07!3;UBERON:0002771!1.75e-07!3;UBERON:0000468!1.97e-07!659 | |ontology_enrichment_uberon=UBERON:0001049!2.70e-92!57;UBERON:0005068!2.70e-92!57;UBERON:0006241!2.70e-92!57;UBERON:0007135!2.70e-92!57;UBERON:0001017!1.13e-81!82;UBERON:0005743!4.77e-80!86;UBERON:0000955!1.36e-78!69;UBERON:0006238!1.36e-78!69;UBERON:0002616!3.73e-77!59;UBERON:0000073!1.48e-76!94;UBERON:0001016!1.48e-76!94;UBERON:0002780!1.96e-74!41;UBERON:0001890!1.96e-74!41;UBERON:0006240!1.96e-74!41;UBERON:0003080!2.07e-72!42;UBERON:0003075!9.93e-72!86;UBERON:0007284!9.93e-72!86;UBERON:0002346!7.74e-68!90;UBERON:0007023!4.93e-65!115;UBERON:0002020!1.75e-60!34;UBERON:0003528!1.75e-60!34;UBERON:0001893!3.96e-60!34;UBERON:0002791!5.14e-58!33;UBERON:0001869!2.81e-56!32;UBERON:0003056!9.25e-52!61;UBERON:0002619!9.00e-44!22;UBERON:0000033!2.04e-41!123;UBERON:0000956!2.45e-41!25;UBERON:0000203!2.45e-41!25;UBERON:0001950!2.69e-39!20;UBERON:0000153!8.72e-39!129;UBERON:0007811!8.72e-39!129;UBERON:0004121!2.89e-38!169;UBERON:0000924!5.44e-37!173;UBERON:0006601!5.44e-37!173;UBERON:0000025!9.61e-24!194;UBERON:0002308!1.68e-20!9;UBERON:0000125!1.68e-20!9;UBERON:0002420!2.94e-20!9;UBERON:0007245!2.94e-20!9;UBERON:0010009!2.94e-20!9;UBERON:0010011!2.94e-20!9;UBERON:0000454!2.94e-20!9;UBERON:0003076!4.98e-20!15;UBERON:0003057!4.98e-20!15;UBERON:0004111!6.95e-17!241;UBERON:0009663!3.63e-16!7;UBERON:0004732!5.14e-16!13;UBERON:0001894!2.49e-15!7;UBERON:0006222!2.49e-15!7;UBERON:0000483!1.63e-14!309;UBERON:0000119!3.25e-14!312;UBERON:0004733!4.55e-14!12;UBERON:0002028!4.55e-14!12;UBERON:0007277!4.55e-14!12;UBERON:0000477!6.14e-14!286;UBERON:0002298!1.23e-13!8;UBERON:0001871!2.10e-13!7;UBERON:0000200!2.22e-13!6;UBERON:0000064!9.70e-13!219;UBERON:0000062!1.72e-12!511;UBERON:0000349!1.84e-12!5;UBERON:0001872!1.12e-11!5;UBERON:0002021!1.36e-11!5;UBERON:0000475!4.36e-11!365;UBERON:0000369!2.14e-10!4;UBERON:0002435!2.14e-10!4;UBERON:0000204!2.14e-10!4;UBERON:0010082!2.14e-10!4;UBERON:0000481!5.64e-10!347;UBERON:0000922!1.17e-09!612;UBERON:0003296!2.04e-09!4;UBERON:0010133!2.04e-09!4;UBERON:0000923!6.27e-09!604;UBERON:0005291!6.27e-09!604;UBERON:0006598!6.27e-09!604;UBERON:0002532!6.27e-09!604;UBERON:0002050!7.03e-09!605;UBERON:0005423!7.03e-09!605;UBERON:0002680!1.11e-08!9;UBERON:0001895!1.11e-08!9;UBERON:0010092!1.11e-08!9;UBERON:0000467!1.79e-08!625;UBERON:0000480!2.00e-08!626;UBERON:0005383!3.85e-08!3;UBERON:0005382!3.85e-08!3;UBERON:0002240!4.32e-08!3;UBERON:0000988!5.44e-08!3;UBERON:0006331!8.38e-08!3;UBERON:0001896!1.15e-07!3;UBERON:0005290!1.15e-07!3;UBERON:0010096!1.15e-07!3;UBERON:0002771!1.75e-07!3;UBERON:0000468!1.97e-07!659 | ||
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|short_description=p1@MMD2 | |short_description=p1@MMD2 | ||
}} | }} |
Latest revision as of 22:40, 18 September 2015
Short description: | p1@MMD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MMD2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000401401, ENST00000404774, ENST00000406755, NM_001100600, NM_198403, uc003snl.1, uc003snn.3, uc003sno.3, uc010ksq.2_5end |
EntrezGene: | MMD2 |
HGNC: | 30133 |
UniProt: | Q8IY49B5MBW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data