FFCP PHASE1:Hg19::chr17:42992860..42992875,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt=B4DIR1 | |UniProt=B4DIR1 | ||
|association_with_transcript=0bp_to_ENST00000376990_5end | |association_with_transcript=0bp_to_ENST00000376990_5end | ||
|cluster_id=chr17:42992860..42992875,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_1_at_GFAP_5end | |description=CAGE_peak_1_at_GFAP_5end | ||
|id=chr17:42992860..42992875,- | |id=chr17:42992860..42992875,- | ||
|ontology_enrichment_celltype=CL:0000128!4.57e-08!7;CL:0000126!4.57e-08!7;CL:0000127!4.57e-08!7;CL:0002453!4.57e-08!7 | |ontology_enrichment_celltype=CL:0000128!4.57e-08!7;CL:0000126!4.57e-08!7;CL:0000127!4.57e-08!7;CL:0002453!4.57e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0000128;1.35e-10;7!CL:0000126;1.35e-10;7!CL:0000127;1.35e-10;7!CL:0002605;1.23e-07;3!CL:0002319;4.08e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.34e-10,7;CL:0000126,1.34e-10,7;CL:0000127,1.34e-10,7;CL:0002453,1.34e-10,7;CL:0002605,1.23e-07,3;CL:0002319,4.06e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.14e-20;82!UBERON:0006241;3.30e-08;3!UBERON:0003057;3.30e-08;3!UBERON:0006215;4.71e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.67e-79!57;UBERON:0005068!7.67e-79!57;UBERON:0006241!7.67e-79!57;UBERON:0007135!7.67e-79!57;UBERON:0001017!3.33e-73!82;UBERON:0005743!3.98e-71!86;UBERON:0007023!5.69e-66!115;UBERON:0002616!6.49e-66!59;UBERON:0000073!1.06e-64!94;UBERON:0001016!1.06e-64!94;UBERON:0000955!3.19e-62!69;UBERON:0006238!3.19e-62!69;UBERON:0003075!1.96e-61!86;UBERON:0007284!1.96e-61!86;UBERON:0002346!9.57e-58!90;UBERON:0002780!2.49e-57!41;UBERON:0001890!2.49e-57!41;UBERON:0006240!2.49e-57!41;UBERON:0003080!1.23e-55!42;UBERON:0002020!9.05e-48!34;UBERON:0003528!9.05e-48!34;UBERON:0001893!1.51e-47!34;UBERON:0002791!3.60e-46!33;UBERON:0001869!2.54e-44!32;UBERON:0003056!3.03e-39!61;UBERON:0004121!3.66e-37!169;UBERON:0000924!9.55e-36!173;UBERON:0006601!9.55e-36!173;UBERON:0000033!2.26e-35!123;UBERON:0000153!3.13e-35!129;UBERON:0007811!3.13e-35!129;UBERON:0000956!3.24e-34!25;UBERON:0000203!3.24e-34!25;UBERON:0002619!8.77e-30!22;UBERON:0001950!8.26e-27!20;UBERON:0003076!2.73e-23!15;UBERON:0003057!2.73e-23!15;UBERON:0000025!5.98e-23!194;UBERON:0004732!4.95e-20!13;UBERON:0004733!1.66e-18!12;UBERON:0002028!1.66e-18!12;UBERON:0007277!1.66e-18!12;UBERON:0004111!2.75e-18!241;UBERON:0000477!3.57e-16!286;UBERON:0002308!7.94e-15!9;UBERON:0000125!7.94e-15!9;UBERON:0002420!1.74e-14!9;UBERON:0007245!1.74e-14!9;UBERON:0010009!1.74e-14!9;UBERON:0010011!1.74e-14!9;UBERON:0000454!1.74e-14!9;UBERON:0000119!6.32e-14!312;UBERON:0002680!8.74e-14!9;UBERON:0001895!8.74e-14!9;UBERON:0010092!8.74e-14!9;UBERON:0000483!3.54e-13!309;UBERON:0009663!1.08e-11!7;UBERON:0000064!2.12e-11!219;UBERON:0001894!6.15e-11!7;UBERON:0006222!6.15e-11!7;UBERON:0002298!9.02e-11!8;UBERON:0000475!1.57e-10!365;UBERON:0000200!8.59e-10!6;UBERON:0001871!1.22e-09!7;UBERON:0002037!3.47e-09!6;UBERON:0006215!3.47e-09!6;UBERON:0000481!7.20e-09!347;UBERON:0000349!9.17e-09!5;UBERON:0005174!2.32e-08!5;UBERON:0001137!2.32e-08!5;UBERON:0001872!2.62e-08!5;UBERON:0002021!2.83e-08!5;UBERON:0000062!1.49e-07!511;UBERON:0000923!1.75e-07!604;UBERON:0005291!1.75e-07!604;UBERON:0006598!1.75e-07!604;UBERON:0002532!1.75e-07!604;UBERON:0000922!1.90e-07!612;UBERON:0002050!2.02e-07!605;UBERON:0005423!2.02e-07!605;UBERON:0000369!3.59e-07!4;UBERON:0002435!3.59e-07!4;UBERON:0000204!3.59e-07!4;UBERON:0010082!3.59e-07!4;UBERON:0000468!4.64e-07!659 | |ontology_enrichment_uberon=UBERON:0001049!7.67e-79!57;UBERON:0005068!7.67e-79!57;UBERON:0006241!7.67e-79!57;UBERON:0007135!7.67e-79!57;UBERON:0001017!3.33e-73!82;UBERON:0005743!3.98e-71!86;UBERON:0007023!5.69e-66!115;UBERON:0002616!6.49e-66!59;UBERON:0000073!1.06e-64!94;UBERON:0001016!1.06e-64!94;UBERON:0000955!3.19e-62!69;UBERON:0006238!3.19e-62!69;UBERON:0003075!1.96e-61!86;UBERON:0007284!1.96e-61!86;UBERON:0002346!9.57e-58!90;UBERON:0002780!2.49e-57!41;UBERON:0001890!2.49e-57!41;UBERON:0006240!2.49e-57!41;UBERON:0003080!1.23e-55!42;UBERON:0002020!9.05e-48!34;UBERON:0003528!9.05e-48!34;UBERON:0001893!1.51e-47!34;UBERON:0002791!3.60e-46!33;UBERON:0001869!2.54e-44!32;UBERON:0003056!3.03e-39!61;UBERON:0004121!3.66e-37!169;UBERON:0000924!9.55e-36!173;UBERON:0006601!9.55e-36!173;UBERON:0000033!2.26e-35!123;UBERON:0000153!3.13e-35!129;UBERON:0007811!3.13e-35!129;UBERON:0000956!3.24e-34!25;UBERON:0000203!3.24e-34!25;UBERON:0002619!8.77e-30!22;UBERON:0001950!8.26e-27!20;UBERON:0003076!2.73e-23!15;UBERON:0003057!2.73e-23!15;UBERON:0000025!5.98e-23!194;UBERON:0004732!4.95e-20!13;UBERON:0004733!1.66e-18!12;UBERON:0002028!1.66e-18!12;UBERON:0007277!1.66e-18!12;UBERON:0004111!2.75e-18!241;UBERON:0000477!3.57e-16!286;UBERON:0002308!7.94e-15!9;UBERON:0000125!7.94e-15!9;UBERON:0002420!1.74e-14!9;UBERON:0007245!1.74e-14!9;UBERON:0010009!1.74e-14!9;UBERON:0010011!1.74e-14!9;UBERON:0000454!1.74e-14!9;UBERON:0000119!6.32e-14!312;UBERON:0002680!8.74e-14!9;UBERON:0001895!8.74e-14!9;UBERON:0010092!8.74e-14!9;UBERON:0000483!3.54e-13!309;UBERON:0009663!1.08e-11!7;UBERON:0000064!2.12e-11!219;UBERON:0001894!6.15e-11!7;UBERON:0006222!6.15e-11!7;UBERON:0002298!9.02e-11!8;UBERON:0000475!1.57e-10!365;UBERON:0000200!8.59e-10!6;UBERON:0001871!1.22e-09!7;UBERON:0002037!3.47e-09!6;UBERON:0006215!3.47e-09!6;UBERON:0000481!7.20e-09!347;UBERON:0000349!9.17e-09!5;UBERON:0005174!2.32e-08!5;UBERON:0001137!2.32e-08!5;UBERON:0001872!2.62e-08!5;UBERON:0002021!2.83e-08!5;UBERON:0000062!1.49e-07!511;UBERON:0000923!1.75e-07!604;UBERON:0005291!1.75e-07!604;UBERON:0006598!1.75e-07!604;UBERON:0002532!1.75e-07!604;UBERON:0000922!1.90e-07!612;UBERON:0002050!2.02e-07!605;UBERON:0005423!2.02e-07!605;UBERON:0000369!3.59e-07!4;UBERON:0002435!3.59e-07!4;UBERON:0000204!3.59e-07!4;UBERON:0010082!3.59e-07!4;UBERON:0000468!4.64e-07!659 | ||
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|short_description=p1@GFAP | |short_description=p1@GFAP | ||
}} | }} |
Latest revision as of 00:00, 25 September 2015
Short description: | p1@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000376990_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | B4DIR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.34e-10 | 7 |
macroglial cell | 1.34e-10 | 7 |
astrocyte | 1.34e-10 | 7 |
oligodendrocyte precursor cell | 1.34e-10 | 7 |
astrocyte of the cerebral cortex | 1.23e-07 | 3 |
neural cell | 4.06e-07 | 25 |