FFCP PHASE1:Hg19::chr4:57547751..57547764,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84525 | |EntrezGene=84525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24961 | |HGNC=24961 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BPY8,G3V294,G3V469,E9PB55 | |UniProt=Q9BPY8,G3V294,G3V469,E9PB55 | ||
|association_with_transcript=107bp_to_ENST00000420433,ENST00000554144,ENST00000557328,NM_001145460,NM_032495,NM_139212,uc003hca.2,uc003hcb.2,uc003hcc.2,uc003hcd.2,uc003hce.2_5end | |association_with_transcript=107bp_to_ENST00000420433,ENST00000554144,ENST00000557328,NM_001145460,NM_032495,NM_139212,uc003hca.2,uc003hcb.2,uc003hcc.2,uc003hcd.2,uc003hce.2_5end | ||
|cluster_id=chr4:57547751..57547764,- | |||
|coexpression_cluster_id=C1942 | |coexpression_cluster_id=C1942 | ||
|description=CAGE_peak_6_at_HOPX_5end | |description=CAGE_peak_6_at_HOPX_5end | ||
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|ontology_enrichment_celltype=CL:0002605!1.03e-07!3;CL:0000047!3.43e-07!8 | |ontology_enrichment_celltype=CL:0002605!1.03e-07!3;CL:0000047!3.43e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002605;3.60e-12;3!CL:0000047;4.83e-09;2!CL:0002319;8.00e-08;25 | |ontology_enrichment_celltype_v019=CL:0002605;3.60e-12;3!CL:0000047;4.83e-09;2!CL:0002319;8.00e-08;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.54e-12,3;CL:0000047,5.66e-12,8;CL:0002319,8.20e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.31e-16;82!UBERON:0006241;2.06e-12;3!UBERON:0003057;2.06e-12;3!UBERON:0006215;5.98e-11;3 | |ontology_enrichment_development_v019=UBERON:0006601;4.31e-16;82!UBERON:0006241;2.06e-12;3!UBERON:0003057;2.06e-12;3!UBERON:0006215;5.98e-11;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.51e-84!57;UBERON:0005068!2.51e-84!57;UBERON:0006241!2.51e-84!57;UBERON:0007135!2.51e-84!57;UBERON:0001017!2.20e-81!82;UBERON:0005743!2.48e-79!86;UBERON:0000073!3.20e-70!94;UBERON:0001016!3.20e-70!94;UBERON:0002616!4.29e-70!59;UBERON:0000955!1.50e-65!69;UBERON:0006238!1.50e-65!69;UBERON:0002780!1.09e-63!41;UBERON:0001890!1.09e-63!41;UBERON:0006240!1.09e-63!41;UBERON:0003080!6.46e-62!42;UBERON:0002020!1.23e-59!34;UBERON:0003528!1.23e-59!34;UBERON:0001893!7.53e-59!34;UBERON:0003075!1.54e-57!86;UBERON:0007284!1.54e-57!86;UBERON:0002791!4.91e-57!33;UBERON:0007023!2.38e-56!115;UBERON:0001869!1.61e-55!32;UBERON:0002346!2.83e-54!90;UBERON:0000956!2.03e-46!25;UBERON:0000203!2.03e-46!25;UBERON:0003056!3.09e-41!61;UBERON:0002619!2.80e-40!22;UBERON:0000033!8.18e-38!123;UBERON:0001950!2.39e-36!20;UBERON:0004121!2.23e-35!169;UBERON:0000153!2.56e-35!129;UBERON:0007811!2.56e-35!129;UBERON:0000924!3.78e-34!173;UBERON:0006601!3.78e-34!173;UBERON:0000025!2.40e-25!194;UBERON:0003076!2.49e-22!15;UBERON:0003057!2.49e-22!15;UBERON:0004111!2.30e-20!241;UBERON:0000477!3.22e-18!286;UBERON:0004733!2.19e-16!12;UBERON:0002028!2.19e-16!12;UBERON:0007277!2.19e-16!12;UBERON:0004732!6.23e-15!13;UBERON:0002308!2.03e-14!9;UBERON:0000125!2.03e-14!9;UBERON:0002420!3.41e-14!9;UBERON:0007245!3.41e-14!9;UBERON:0010009!3.41e-14!9;UBERON:0010011!3.41e-14!9;UBERON:0000454!3.41e-14!9;UBERON:0000483!1.91e-13!309;UBERON:0000119!3.78e-13!312;UBERON:0001871!4.21e-13!7;UBERON:0002298!7.20e-13!8;UBERON:0000200!1.02e-12!6;UBERON:0000475!1.21e-12!365;UBERON:0000064!1.61e-12!219;UBERON:0000349!3.96e-11!5;UBERON:0002680!7.05e-11!9;UBERON:0001895!7.05e-11!9;UBERON:0010092!7.05e-11!9;UBERON:0002021!1.13e-10!5;UBERON:0001872!1.20e-10!5;UBERON:0009663!1.96e-10!7;UBERON:0000062!3.52e-10!511;UBERON:0000481!4.16e-10!347;UBERON:0000922!1.28e-09!612;UBERON:0000923!1.81e-09!604;UBERON:0005291!1.81e-09!604;UBERON:0006598!1.81e-09!604;UBERON:0002532!1.81e-09!604;UBERON:0002050!2.05e-09!605;UBERON:0005423!2.05e-09!605;UBERON:0000369!5.57e-09!4;UBERON:0002435!5.57e-09!4;UBERON:0000204!5.57e-09!4;UBERON:0010082!5.57e-09!4;UBERON:0000467!6.32e-09!625;UBERON:0000480!7.12e-09!626;UBERON:0002240!7.43e-08!3;UBERON:0000468!8.95e-08!659;UBERON:0002771!1.36e-07!3;UBERON:0000988!1.72e-07!3;UBERON:0001896!1.72e-07!3;UBERON:0005290!1.72e-07!3;UBERON:0010096!1.72e-07!3;UBERON:0006331!2.17e-07!3;UBERON:0005383!2.85e-07!3;UBERON:0005382!2.85e-07!3;UBERON:0001894!6.33e-07!7;UBERON:0006222!6.33e-07!7 | |ontology_enrichment_uberon=UBERON:0001049!2.51e-84!57;UBERON:0005068!2.51e-84!57;UBERON:0006241!2.51e-84!57;UBERON:0007135!2.51e-84!57;UBERON:0001017!2.20e-81!82;UBERON:0005743!2.48e-79!86;UBERON:0000073!3.20e-70!94;UBERON:0001016!3.20e-70!94;UBERON:0002616!4.29e-70!59;UBERON:0000955!1.50e-65!69;UBERON:0006238!1.50e-65!69;UBERON:0002780!1.09e-63!41;UBERON:0001890!1.09e-63!41;UBERON:0006240!1.09e-63!41;UBERON:0003080!6.46e-62!42;UBERON:0002020!1.23e-59!34;UBERON:0003528!1.23e-59!34;UBERON:0001893!7.53e-59!34;UBERON:0003075!1.54e-57!86;UBERON:0007284!1.54e-57!86;UBERON:0002791!4.91e-57!33;UBERON:0007023!2.38e-56!115;UBERON:0001869!1.61e-55!32;UBERON:0002346!2.83e-54!90;UBERON:0000956!2.03e-46!25;UBERON:0000203!2.03e-46!25;UBERON:0003056!3.09e-41!61;UBERON:0002619!2.80e-40!22;UBERON:0000033!8.18e-38!123;UBERON:0001950!2.39e-36!20;UBERON:0004121!2.23e-35!169;UBERON:0000153!2.56e-35!129;UBERON:0007811!2.56e-35!129;UBERON:0000924!3.78e-34!173;UBERON:0006601!3.78e-34!173;UBERON:0000025!2.40e-25!194;UBERON:0003076!2.49e-22!15;UBERON:0003057!2.49e-22!15;UBERON:0004111!2.30e-20!241;UBERON:0000477!3.22e-18!286;UBERON:0004733!2.19e-16!12;UBERON:0002028!2.19e-16!12;UBERON:0007277!2.19e-16!12;UBERON:0004732!6.23e-15!13;UBERON:0002308!2.03e-14!9;UBERON:0000125!2.03e-14!9;UBERON:0002420!3.41e-14!9;UBERON:0007245!3.41e-14!9;UBERON:0010009!3.41e-14!9;UBERON:0010011!3.41e-14!9;UBERON:0000454!3.41e-14!9;UBERON:0000483!1.91e-13!309;UBERON:0000119!3.78e-13!312;UBERON:0001871!4.21e-13!7;UBERON:0002298!7.20e-13!8;UBERON:0000200!1.02e-12!6;UBERON:0000475!1.21e-12!365;UBERON:0000064!1.61e-12!219;UBERON:0000349!3.96e-11!5;UBERON:0002680!7.05e-11!9;UBERON:0001895!7.05e-11!9;UBERON:0010092!7.05e-11!9;UBERON:0002021!1.13e-10!5;UBERON:0001872!1.20e-10!5;UBERON:0009663!1.96e-10!7;UBERON:0000062!3.52e-10!511;UBERON:0000481!4.16e-10!347;UBERON:0000922!1.28e-09!612;UBERON:0000923!1.81e-09!604;UBERON:0005291!1.81e-09!604;UBERON:0006598!1.81e-09!604;UBERON:0002532!1.81e-09!604;UBERON:0002050!2.05e-09!605;UBERON:0005423!2.05e-09!605;UBERON:0000369!5.57e-09!4;UBERON:0002435!5.57e-09!4;UBERON:0000204!5.57e-09!4;UBERON:0010082!5.57e-09!4;UBERON:0000467!6.32e-09!625;UBERON:0000480!7.12e-09!626;UBERON:0002240!7.43e-08!3;UBERON:0000468!8.95e-08!659;UBERON:0002771!1.36e-07!3;UBERON:0000988!1.72e-07!3;UBERON:0001896!1.72e-07!3;UBERON:0005290!1.72e-07!3;UBERON:0010096!1.72e-07!3;UBERON:0006331!2.17e-07!3;UBERON:0005383!2.85e-07!3;UBERON:0005382!2.85e-07!3;UBERON:0001894!6.33e-07!7;UBERON:0006222!6.33e-07!7 | ||
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| ||
|short_description=p6@HOPX | |short_description=p6@HOPX | ||
}} | }} |
Latest revision as of 03:01, 18 September 2015
Short description: | p6@HOPX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HOPX_5end |
Coexpression cluster: | C1942_Neural_spinal_Astrocyte_Neurons_caudate_locus_medial |
Association with transcript: | 107bp_to_ENST00000420433, ENST00000554144, ENST00000557328, NM_001145460, NM_032495, NM_139212, uc003hca.2, uc003hcb.2, uc003hcc.2, uc003hcd.2, uc003hce.2_5end |
EntrezGene: | HOPX |
HGNC: | 24961 |
UniProt: | Q9BPY8G3V294G3V469E9PB55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.54e-12 | 3 |
neuronal stem cell | 5.66e-12 | 8 |
neural cell | 8.20e-08 | 25 |