FFCP PHASE1:Hg19::chr12:106976678..106976708,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:106976678..106976708,+ to FFCP PHASE1:Hg19::chr12:106976678..106976708,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5992 | |EntrezGene=5992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9985 | |HGNC=9985 | ||
|TSSclassifier=strong | |||
|UniProt=Q33E94 | |UniProt=Q33E94 | ||
|association_with_transcript=0bp_to_ENST00000392842,NM_213594_5end | |||
|cluster_id=chr12:106976678..106976708,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_RFX4_5end | |||
|id=chr12:106976678..106976708,+ | |||
|ontology_enrichment_celltype=CL:0000047!2.10e-14!8;CL:0000540!5.27e-11!6;CL:0000031!5.27e-11!6;CL:0000404!5.27e-11!6;CL:0002319!3.46e-09!25;CL:0000128!7.61e-07!7;CL:0000126!7.61e-07!7;CL:0000127!7.61e-07!7;CL:0002453!7.61e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000128;5.25e-09;7!CL:0000126;5.25e-09;7!CL:0000127;5.25e-09;7!CL:0002605;2.31e-08;3!CL:0002319;1.05e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,5.40e-09,7;CL:0000126,5.40e-09,7;CL:0000127,5.40e-09,7;CL:0002453,5.40e-09,7;CL:0002605,2.47e-08,3;CL:0000047,4.65e-08,8;CL:0002319,1.06e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.45e-22;82!UBERON:0006241;3.91e-10;3!UBERON:0003057;3.91e-10;3!UBERON:0006215;2.21e-09;3!UBERON:0010122;1.79e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;6.96e-77;53!UBERON:0002616;6.96e-77;53!UBERON:0001893;3.01e-76;34!UBERON:0002780;4.16e-76;41!UBERON:0001890;4.16e-76;41!UBERON:0003528;5.60e-76;34!UBERON:0002020;5.60e-76;34!UBERON:0002791;3.86e-75;32!UBERON:0001869;5.19e-75;32!UBERON:0000956;1.66e-63;25!UBERON:0000203;1.66e-63;25!UBERON:0002619;1.24e-56;22!UBERON:0000955;6.98e-52;68!UBERON:0001950;9.61e-51;20!UBERON:0001017;1.48e-49;75!UBERON:0001016;2.83e-42;83!UBERON:0004732;1.97e-29;13!UBERON:0004733;2.65e-27;12!UBERON:0002028;2.65e-27;12!UBERON:0002420;1.68e-26;9!UBERON:0007245;1.68e-26;9!UBERON:0010009;1.68e-26;9!UBERON:0010011;1.68e-26;9!UBERON:0000454;1.68e-26;9!UBERON:0000125;1.75e-26;9!UBERON:0002308;1.75e-26;9!UBERON:0009663;7.19e-21;7!UBERON:0001894;1.69e-19;7!UBERON:0002680;4.37e-19;9!UBERON:0001895;4.37e-19;9!UBERON:0002298;4.74e-18;6!UBERON:0000200;2.24e-17;6!UBERON:0007023;9.24e-17;114!UBERON:0000349;1.06e-15;5!UBERON:0001871;6.57e-15;6!UBERON:0002021;1.79e-14;5!UBERON:0001872;1.95e-14;5!UBERON:0011216;5.28e-14;132!UBERON:0000369;1.15e-12;4!UBERON:0002435;1.15e-12;4!UBERON:0000204;1.15e-12;4!UBERON:0002784;4.21e-12;4!UBERON:0002037;2.29e-11;6!UBERON:0003296;2.67e-11;4!UBERON:0010133;2.67e-11;4!UBERON:0002240;3.91e-10;3!UBERON:0005174;3.91e-10;3!UBERON:0005383;3.91e-10;3!UBERON:0001137;3.91e-10;3!UBERON:0005382;3.91e-10;3!UBERON:0001896;4.35e-10;3!UBERON:0005290;4.35e-10;3!UBERON:0010314;7.51e-10;132!UBERON:0000988;1.12e-09;3!UBERON:0001870;1.63e-09;3!UBERON:0001954;1.61e-07;2!UBERON:0003022;1.61e-07;2!UBERON:0002421;1.61e-07;2!UBERON:0002600;1.61e-07;2!UBERON:0001897;1.73e-07;2!UBERON:0010225;1.73e-07;2!UBERON:0001873;1.79e-07;2!UBERON:0001876;2.50e-07;2!UBERON:0002148;2.62e-07;2!UBERON:0006331;2.62e-07;2!UBERON:0009662;2.62e-07;2!UBERON:0001875;2.70e-07;2!UBERON:0006514;2.70e-07;2!UBERON:0002771;4.11e-07;2!UBERON:0002702;4.50e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.50e-145,56;UBERON:0005068,9.50e-145,56;UBERON:0006241,9.50e-145,56;UBERON:0007135,9.50e-145,56;UBERON:0000073,1.47e-135,53;UBERON:0002616,1.47e-135,53;UBERON:0001017,4.28e-131,81;UBERON:0001016,1.35e-120,89;UBERON:0000955,1.26e-114,68;UBERON:0006238,1.26e-114,68;UBERON:0002780,1.10e-107,41;UBERON:0001890,1.10e-107,41;UBERON:0003080,1.10e-107,41;UBERON:0006240,1.10e-107,41;UBERON:0003075,1.20e-98,82;UBERON:0007284,1.20e-98,82;UBERON:0002346,1.77e-93,86;UBERON:0003528,3.41e-89,34;UBERON:0002020,3.41e-89,34;UBERON:0001893,8.47e-89,34;UBERON:0002791,2.45e-83,32;UBERON:0001869,3.25e-83,32;UBERON:0010371,4.40e-75,104;UBERON:0003056,9.93e-73,61;UBERON:0000956,1.59e-63,25;UBERON:0000203,1.59e-63,25;UBERON:0010314,9.07e-59,132;UBERON:0004121,7.06e-57,171;UBERON:0000924,7.06e-57,171;UBERON:0006601,7.06e-57,171;UBERON:0002619,1.11e-56,22;UBERON:0007023,2.40e-53,114;UBERON:0001950,8.50e-51,20;UBERON:0011216,2.00e-43,223;UBERON:0003076,1.12e-35,15;UBERON:0003057,1.12e-35,15;UBERON:0000025,4.27e-33,192;UBERON:0004732,1.89e-29,13;UBERON:0004733,2.58e-27,12;UBERON:0002028,2.58e-27,12;UBERON:0007277,2.58e-27,12;UBERON:0002420,1.68e-26,9;UBERON:0007245,1.68e-26,9;UBERON:0010009,1.68e-26,9;UBERON:0010011,1.68e-26,9;UBERON:0000454,1.68e-26,9;UBERON:0000125,1.83e-26,9;UBERON:0002308,1.83e-26,9;UBERON:0004111,8.56e-24,240;UBERON:0009663,7.40e-21,7;UBERON:0001894,1.72e-19,7;UBERON:0006222,1.72e-19,7;UBERON:0002680,4.32e-19,9;UBERON:0001895,4.32e-19,9;UBERON:0010092,4.32e-19,9;UBERON:0002298,4.74e-18,6;UBERON:0000483,1.67e-17,306;UBERON:0000200,2.08e-17,6;UBERON:0000119,3.34e-17,309;UBERON:0000349,1.05e-15,5;UBERON:0001871,6.11e-15,6;UBERON:0001872,1.76e-14,5;UBERON:0002021,1.81e-14,5;UBERON:0000369,1.15e-12,4;UBERON:0002435,1.15e-12,4;UBERON:0000204,1.15e-12,4;UBERON:0010082,1.15e-12,4;UBERON:0002784,4.15e-12,4;UBERON:0002037,2.24e-11,6;UBERON:0006215,2.24e-11,6;UBERON:0003296,2.67e-11,4;UBERON:0010133,2.67e-11,4;UBERON:0002240,3.91e-10,3;UBERON:0005174,3.91e-10,3;UBERON:0005383,3.91e-10,3;UBERON:0001137,3.91e-10,3;UBERON:0005382,3.91e-10,3;UBERON:0001896,4.28e-10,3;UBERON:0005290,4.28e-10,3;UBERON:0010096,4.28e-10,3;UBERON:0000988,1.14e-09,3;UBERON:0000923,1.14e-09,560;UBERON:0010316,1.14e-09,560;UBERON:0005291,1.14e-09,560;UBERON:0006598,1.14e-09,560;UBERON:0010317,1.14e-09,560;UBERON:0002532,1.14e-09,560;UBERON:0000922,1.47e-09,592;UBERON:0001870,1.66e-09,3;UBERON:0002050,1.72e-09,564;UBERON:0005423,9.14e-09,581;UBERON:0001954,1.63e-07,2;UBERON:0003022,1.63e-07,2;UBERON:0002421,1.63e-07,2;UBERON:0002600,1.63e-07,2;UBERON:0001897,1.73e-07,2;UBERON:0010225,1.73e-07,2;UBERON:0001873,1.79e-07,2;UBERON:0010122,1.79e-07,2;UBERON:0001876,2.43e-07,2;UBERON:0002148,2.66e-07,2;UBERON:0006331,2.66e-07,2;UBERON:0009662,2.66e-07,2;UBERON:0001875,2.74e-07,2;UBERON:0006514,2.74e-07,2;UBERON:0002771,4.05e-07,2;UBERON:0002702,4.57e-07,2 | |||
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| ||
|short_description=p2@RFX4 | |||
}} | }} |
Latest revision as of 03:00, 16 September 2015
Short description: | p2@RFX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RFX4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000392842, NM_213594_5end |
EntrezGene: | RFX4 |
HGNC: | 9985 |
UniProt: | Q33E94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 5.40e-09 | 7 |
macroglial cell | 5.40e-09 | 7 |
astrocyte | 5.40e-09 | 7 |
oligodendrocyte precursor cell | 5.40e-09 | 7 |
astrocyte of the cerebral cortex | 2.47e-08 | 3 |
neuronal stem cell | 4.65e-08 | 8 |
neural cell | 1.06e-07 | 25 |