FFCP PHASE1:Hg19::chr21:17442799..17442832,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=388815|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=1274|TSSclassifier=S|UniProt=|association_with_transcript=-9bp_to_ENST00000458468,NR_027790,uc002ykb.2_5end|coexpression_cluster_id=C334|description=CAGE_peak_17_at_LINC00478_5end|id=chr21:17442799..17442832,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;2.35e-26;82!UBERON:0006215;1.75e-11;3!UBERON:0006241;2.47e-10;3!UBERON:0003057;2.47e-10;3!UBERON:0010122;4.76e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.92e-69!57;UBERON:0005068!7.92e-69!57;UBERON:0006241!7.92e-69!57;UBERON:0007135!7.92e-69!57;UBERON:0000073!7.08e-68!94;UBERON:0001016!7.08e-68!94;UBERON:0005743!8.94e-66!86;UBERON:0001017!1.55e-65!82;UBERON:0002616!3.57e-62!59;UBERON:0000955!5.59e-61!69;UBERON:0006238!5.59e-61!69;UBERON:0002780!7.44e-55!41;UBERON:0001890!7.44e-55!41;UBERON:0006240!7.44e-55!41;UBERON:0003080!3.17e-53!42;UBERON:0002346!3.52e-52!90;UBERON:0003075!5.89e-52!86;UBERON:0007284!5.89e-52!86;UBERON:0007023!2.79e-45!115;UBERON:0001893!3.40e-44!34;UBERON:0002020!6.43e-44!34;UBERON:0003528!6.43e-44!34;UBERON:0002791!1.06e-42!33;UBERON:0001869!2.76e-41!32;UBERON:0000924!4.97e-40!173;UBERON:0006601!4.97e-40!173;UBERON:0000033!5.15e-40!123;UBERON:0000153!7.58e-40!129;UBERON:0007811!7.58e-40!129;UBERON:0003056!1.56e-39!61;UBERON:0004121!3.16e-39!169;UBERON:0000956!2.95e-31!25;UBERON:0000203!2.95e-31!25;UBERON:0001950!3.62e-28!20;UBERON:0002619!4.45e-28!22;UBERON:0003076!4.64e-16!15;UBERON:0003057!4.64e-16!15;UBERON:0000475!2.47e-14!365;UBERON:0002420!3.16e-14!9;UBERON:0007245!3.16e-14!9;UBERON:0010009!3.16e-14!9;UBERON:0010011!3.16e-14!9;UBERON:0000454!3.16e-14!9;UBERON:0002308!5.40e-14!9;UBERON:0000125!5.40e-14!9;UBERON:0004732!2.36e-13!13;UBERON:0000025!5.30e-13!194;UBERON:0004111!6.67e-13!241;UBERON:0004733!4.06e-12!12;UBERON:0002028!4.06e-12!12;UBERON:0007277!4.06e-12!12;UBERON:0000477!6.32e-12!286;UBERON:0000062!6.58e-12!511;UBERON:0001894!6.79e-12!7;UBERON:0006222!6.79e-12!7;UBERON:0009663!2.18e-11!7;UBERON:0000468!1.68e-10!659;UBERON:0000064!2.12e-10!219;UBERON:0000119!2.45e-10!312;UBERON:0000467!2.89e-10!625;UBERON:0000480!3.40e-10!626;UBERON:0000483!3.97e-10!309;UBERON:0000200!4.50e-10!6;UBERON:0001871!5.25e-10!7;UBERON:0000922!8.48e-10!612;UBERON:0002298!2.09e-09!8;UBERON:0002050!2.93e-09!605;UBERON:0005423!2.93e-09!605;UBERON:0000923!7.92e-09!604;UBERON:0005291!7.92e-09!604;UBERON:0006598!7.92e-09!604;UBERON:0002532!7.92e-09!604;UBERON:0001872!8.20e-09!5;UBERON:0002021!1.37e-08!5;UBERON:0000481!2.48e-08!347;UBERON:0002680!2.69e-08!9;UBERON:0001895!2.69e-08!9;UBERON:0010092!2.69e-08!9;UBERON:0003296!8.94e-08!4;UBERON:0010133!8.94e-08!4;UBERON:0000369!2.91e-07!4;UBERON:0002435!2.91e-07!4;UBERON:0000204!2.91e-07!4;UBERON:0010082!2.91e-07!4|ontology_enrichment_uberon_v019=UBERON:0000073;5.30e-67;53!UBERON:0002616;5.30e-67;53!UBERON:0002780;1.23e-66;41!UBERON:0001890;1.23e-66;41!UBERON:0003528;6.24e-63;34!UBERON:0002020;6.24e-63;34!UBERON:0001893;8.78e-63;34!UBERON:0001869;1.36e-59;32!UBERON:0002791;1.44e-59;32!UBERON:0002619;8.87e-54;22!UBERON:0001950;3.11e-53;20!UBERON:0000956;6.04e-47;25!UBERON:0000203;6.04e-47;25!UBERON:0000955;8.80e-43;68!UBERON:0001017;6.10e-41;75!UBERON:0001016;9.40e-37;83!UBERON:0002420;1.93e-28;9!UBERON:0007245;1.93e-28;9!UBERON:0010009;1.93e-28;9!UBERON:0010011;1.93e-28;9!UBERON:0000454;1.93e-28;9!UBERON:0000125;5.23e-28;9!UBERON:0002308;5.23e-28;9!UBERON:0001894;1.27e-23;7!UBERON:0004732;4.42e-23;13!UBERON:0009663;1.31e-22;7!UBERON:0004733;1.66e-20;12!UBERON:0002028;1.66e-20;12!UBERON:0000200;2.51e-19;6!UBERON:0002298;3.32e-18;6!UBERON:0007023;3.53e-18;114!UBERON:0001871;5.88e-17;6!UBERON:0001872;7.31e-17;5!UBERON:0003296;9.29e-15;4!UBERON:0010133;9.29e-15;4!UBERON:0002784;1.53e-14;4!UBERON:0000369;9.86e-14;4!UBERON:0002435;9.86e-14;4!UBERON:0000204;9.86e-14;4!UBERON:0011216;3.35e-13;132!UBERON:0002680;8.34e-13;9!UBERON:0001895;8.34e-13;9!UBERON:0002021;2.54e-11;5!UBERON:0000349;5.25e-11;5!UBERON:0005383;9.38e-11;3!UBERON:0005382;9.38e-11;3!UBERON:0001870;2.28e-10;3!UBERON:0002240;2.47e-10;3!UBERON:0005174;2.47e-10;3!UBERON:0001137;2.47e-10;3!UBERON:0010314;3.20e-10;132!UBERON:0001896;4.28e-10;3!UBERON:0005290;4.28e-10;3!UBERON:0000988;7.97e-10;3!UBERON:0001905;2.46e-08;2!UBERON:0002757;2.46e-08;2!UBERON:0010134;2.46e-08;2!UBERON:0005408;2.46e-08;2!UBERON:0001899;2.46e-08;2!UBERON:0000007;4.08e-08;2!UBERON:0001873;4.76e-08;2!UBERON:0002771;5.66e-08;2!UBERON:0001897;6.71e-08;2!UBERON:0010225;6.71e-08;2!UBERON:0001875;1.29e-07;2!UBERON:0006514;1.29e-07;2!UBERON:0001876;1.58e-07;2!UBERON:0005162;1.58e-07;2!UBERON:0000122;1.58e-07;2!UBERON:0002702;2.27e-07;2!UBERON:0002148;4.25e-07;2!UBERON:0006331;4.25e-07;2!UBERON:0009662;4.25e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.65e-1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=388815 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1274 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-9bp_to_ENST00000458468,NR_027790,uc002ykb.2_5end | |||
|coexpression_cluster_id=C334 | |||
|description=CAGE_peak_17_at_LINC00478_5end | |||
|id=chr21:17442799..17442832,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.35e-26;82!UBERON:0006215;1.75e-11;3!UBERON:0006241;2.47e-10;3!UBERON:0003057;2.47e-10;3!UBERON:0010122;4.76e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0.684372125364421,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.179389635688862,0.427114777637135,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0.323292113637624,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,1.54657762555539,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69904730449319,0,0,0,0,0,3.97659059106519,1.96937182974718,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,2.87581104301739,7.98455192004777,0,0,0,0,0,0,1.03423011972439,0.291604613383254,0,9.74315524395223,2.17073589525734,9.15490417902499,13.7118282314719,2.95547618953547,1.31631238292384,0,0.139423744278603,1.38510465306835,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,1.73110911793673,0,0.0884575645033392,0,0,0,0,3.2352543830725,0,1.1713222286267,0,0,0,0.394584402849391,0,12.5489832268501,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,1.059073520298,0.90392296312213,0,0,2.78567502205866,0,0,0.213452994739353,0,0,0.916292769327325,0,0,0,0,0,0.104602846312333,0,0,4.20294202096853,1.36905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,4.22230558945884,0,0,0,0,0,2.00473536971481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,1.85125642439766,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,1.77213635993397,3.90484047686282,2.8793914062495,2.29363678276028,1.88579387612649,1.61450647647597,0,0.249960815924213,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31820246764154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.215649622793364,0.943595651135378,0.982886743728125,0,0.212574920101683,0,0,0,0,0,0,0,2.50493977876192,5.6678630530234,3.83121261737163,0.82046545696302,7.56215088665154,1.03735878696327,2.42213468447777,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,2.97165372320936,3.90539049306924,2.68692835451539,2.47321659756237,9.84554656232795,0,0,0.175871244359621,0.127762427639595,6.96412386641773,7.0619581665953,3.64179362541979,5.46389259243114,0,0,0,1.90315252335129,1.44700101838268,0,0,0.549451649953598,1.41404030924402,0,0,0,0,0.78624198594322,0,0.23248285073625,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,2.4285549652957,0,0,0.594600453887843,0.11294608203896,0,0,0,0.218559560503957,0,0,0,1.76677620403451,4.1586496045792,1.2679671827502,0,0,0,0,0,0,0,0,0,2.15009374727177,0.473314686579554,1.01987235286372,4.79985759374415,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,4.1458471972939,2.48239190068549,0.213233981900981,0.476128862927481,0,0,0,0,0.202117188958219,0.435433495793923,0.342233301085281,0,0,0.665320713092027,0,0,0,0,0,1.71138021856013,0.813792356631477,0,0.201273793591026,0 | |||
|short_description=p17@LINC00478 | |||
}} |
Revision as of 09:50, 12 September 2013
Short description: | p17@LINC00478 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_LINC00478_5end |
Coexpression cluster: | C334_cerebellum_pineal_occipital_pituitary_amygdala_medial_caudate |
Association with transcript: | -9bp_to_ENST00000458468, NR_027790, uc002ykb.2_5end |
EntrezGene: | LINC00478 |
HGNC: | 1274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.