FFCP PHASE1:Hg19::chrX:13956824..13956835,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4461 | |||
|TSSclassifier=strong | |||
|UniProt=Q13491 | |||
|association_with_transcript=0bp_to_NM_001001994,uc004cvx.2,uc004cwa.2_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_GPM6B_5end | |||
|id=chrX:13956824..13956835,- | |||
|ontology_enrichment_celltype=CL:0000133!5.33e-10!59;CL:0002319!7.11e-09!25;CL:0000047!4.04e-08!8;CL:0000221!1.18e-07!71;CL:0000333!3.73e-07!41;CL:0000148!5.80e-07!10;CL:0000541!5.80e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.08e-11;10!CL:0000540;5.39e-10;6!CL:0000404;5.39e-10;6!CL:0002319;3.67e-09;25!CL:0002322;1.80e-08;5!CL:0000147;7.83e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.19e-13,8;CL:0000148,9.76e-12,10;CL:0000541,9.76e-12,10;CL:0000540,5.10e-10,6;CL:0000031,5.10e-10,6;CL:0000404,5.10e-10,6;CL:0000133,2.82e-09,59;CL:0002319,3.32e-09,25;CL:0002322,2.01e-08,5;CL:0000221,4.17e-08,72;CL:0000147,7.30e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.49e-14;82!CL:0000031;5.39e-10;6!UBERON:0006241;2.96e-07;3!UBERON:0003057;2.96e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.77e-47!94;UBERON:0001016!1.77e-47!94;UBERON:0001017!2.70e-47!82;UBERON:0005743!2.60e-45!86;UBERON:0001049!3.93e-43!57;UBERON:0005068!3.93e-43!57;UBERON:0006241!3.93e-43!57;UBERON:0007135!3.93e-43!57;UBERON:0003075!1.38e-36!86;UBERON:0007284!1.38e-36!86;UBERON:0000955!4.24e-36!69;UBERON:0006238!4.24e-36!69;UBERON:0002346!5.99e-36!90;UBERON:0002616!1.11e-34!59;UBERON:0004121!1.76e-34!169;UBERON:0000924!1.87e-34!173;UBERON:0006601!1.87e-34!173;UBERON:0002780!6.77e-33!41;UBERON:0001890!6.77e-33!41;UBERON:0006240!6.77e-33!41;UBERON:0003080!1.05e-31!42;UBERON:0002020!4.14e-31!34;UBERON:0003528!4.14e-31!34;UBERON:0001893!5.22e-31!34;UBERON:0002791!4.51e-30!33;UBERON:0001869!5.28e-29!32;UBERON:0000033!6.03e-29!123;UBERON:0003056!2.46e-28!61;UBERON:0000153!7.63e-28!129;UBERON:0007811!7.63e-28!129;UBERON:0007023!9.54e-28!115;UBERON:0000956!2.30e-22!25;UBERON:0000203!2.30e-22!25;UBERON:0002619!5.71e-20!22;UBERON:0001950!6.41e-18!20;UBERON:0003076!2.91e-12!15;UBERON:0003057!2.91e-12!15;UBERON:0000922!4.49e-11!612;UBERON:0004732!3.16e-10!13;UBERON:0002308!3.54e-10!9;UBERON:0000125!3.54e-10!9;UBERON:0002420!4.09e-10!9;UBERON:0007245!4.09e-10!9;UBERON:0010009!4.09e-10!9;UBERON:0010011!4.09e-10!9;UBERON:0000454!4.09e-10!9;UBERON:0004733!2.86e-09!12;UBERON:0002028!2.86e-09!12;UBERON:0007277!2.86e-09!12;UBERON:0000475!4.16e-09!365;UBERON:0000923!1.14e-08!604;UBERON:0005291!1.14e-08!604;UBERON:0006598!1.14e-08!604;UBERON:0002532!1.14e-08!604;UBERON:0002050!1.43e-08!605;UBERON:0005423!1.43e-08!605;UBERON:0000481!1.45e-08!347;UBERON:0000064!3.16e-08!219;UBERON:0009663!3.50e-08!7;UBERON:0002298!4.95e-07!8;UBERON:0000468!6.15e-07!659;UBERON:0000200!8.06e-07!6;UBERON:0000119!8.88e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.34e-47;34!UBERON:0003528;2.25e-47;34!UBERON:0002020;2.25e-47;34!UBERON:0002791;6.16e-47;32!UBERON:0001869;8.64e-47;32!UBERON:0002780;2.06e-42;41!UBERON:0001890;2.06e-42;41!UBERON:0000073;9.21e-40;53!UBERON:0002616;9.21e-40;53!UBERON:0000956;9.22e-40;25!UBERON:0000203;9.22e-40;25!UBERON:0002619;2.16e-35;22!UBERON:0001950;1.15e-31;20!UBERON:0001017;4.47e-29;75!UBERON:0000955;9.09e-29;68!UBERON:0001016;1.16e-25;83!UBERON:0000125;4.28e-17;9!UBERON:0002308;4.28e-17;9!UBERON:0002420;5.70e-17;9!UBERON:0007245;5.70e-17;9!UBERON:0010009;5.70e-17;9!UBERON:0010011;5.70e-17;9!UBERON:0000454;5.70e-17;9!UBERON:0009663;1.67e-13;7!UBERON:0004732;2.44e-13;13!UBERON:0002298;4.64e-12;6!UBERON:0004733;1.04e-11;12!UBERON:0002028;1.04e-11;12!UBERON:0000200;4.27e-11;6!UBERON:0000349;2.03e-10;5!UBERON:0002021;8.38e-10;5!UBERON:0011216;1.01e-09;132!UBERON:0001871;1.28e-09;6!UBERON:0001872;2.26e-09;5!UBERON:0007023;2.37e-09;114!UBERON:0000369;3.05e-08;4!UBERON:0002435;3.05e-08;4!UBERON:0000204;3.05e-08;4!UBERON:0002784;2.16e-07;4!UBERON:0002240;2.96e-07;3!UBERON:0005174;2.96e-07;3!UBERON:0001137;2.96e-07;3!UBERON:0002680;4.55e-07;9!UBERON:0001895;4.55e-07;9!UBERON:0001896;5.99e-07;3!UBERON:0005290;5.99e-07;3!UBERON:0000988;9.35e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.40e-82,81;UBERON:0001016,6.01e-77,89;UBERON:0001049,3.68e-76,56;UBERON:0005068,3.68e-76,56;UBERON:0006241,3.68e-76,56;UBERON:0007135,3.68e-76,56;UBERON:0000073,2.48e-70,53;UBERON:0002616,2.48e-70,53;UBERON:0000955,1.85e-63,68;UBERON:0006238,1.85e-63,68;UBERON:0002780,8.48e-60,41;UBERON:0001890,8.48e-60,41;UBERON:0003080,8.48e-60,41;UBERON:0006240,8.48e-60,41;UBERON:0003075,1.52e-57,82;UBERON:0007284,1.52e-57,82;UBERON:0003528,1.46e-55,34;UBERON:0002020,1.46e-55,34;UBERON:0001893,2.23e-55,34;UBERON:0002346,4.73e-54,86;UBERON:0002791,7.72e-52,32;UBERON:0001869,9.87e-52,32;UBERON:0010371,2.19e-50,104;UBERON:0003056,5.33e-47,61;UBERON:0004121,1.82e-43,171;UBERON:0000924,1.82e-43,171;UBERON:0006601,1.82e-43,171;UBERON:0000956,1.14e-39,25;UBERON:0000203,1.14e-39,25;UBERON:0010314,8.49e-36,132;UBERON:0002619,2.52e-35,22;UBERON:0001950,1.33e-31,20;UBERON:0007023,3.64e-28,114;UBERON:0011216,2.22e-27,223;UBERON:0000125,4.34e-17,9;UBERON:0002308,4.34e-17,9;UBERON:0002420,5.62e-17,9;UBERON:0007245,5.62e-17,9;UBERON:0010009,5.62e-17,9;UBERON:0010011,5.62e-17,9;UBERON:0000454,5.62e-17,9;UBERON:0003076,7.36e-17,15;UBERON:0003057,7.36e-17,15;UBERON:0009663,1.69e-13,7;UBERON:0004732,2.30e-13,13;UBERON:0002298,4.28e-12,6;UBERON:0000025,4.56e-12,192;UBERON:0004733,9.79e-12,12;UBERON:0002028,9.79e-12,12;UBERON:0007277,9.79e-12,12;UBERON:0000483,2.97e-11,306;UBERON:0000200,4.72e-11,6;UBERON:0000119,5.70e-11,309;UBERON:0000349,2.03e-10,5;UBERON:0002021,9.20e-10,5;UBERON:0001871,1.32e-09,6;UBERON:0001872,2.37e-09,5;UBERON:0000922,1.63e-08,592;UBERON:0000369,3.14e-08,4;UBERON:0002435,3.14e-08,4;UBERON:0000204,3.14e-08,4;UBERON:0010082,3.14e-08,4;UBERON:0004111,5.84e-08,240;UBERON:0002784,1.70e-07,4;UBERON:0002240,3.02e-07,3;UBERON:0005174,3.02e-07,3;UBERON:0001137,3.02e-07,3;UBERON:0002680,4.35e-07,9;UBERON:0001895,4.35e-07,9;UBERON:0010092,4.35e-07,9;UBERON:0000923,4.69e-07,560;UBERON:0010316,4.69e-07,560;UBERON:0005291,4.69e-07,560;UBERON:0006598,4.69e-07,560;UBERON:0010317,4.69e-07,560;UBERON:0002532,4.69e-07,560;UBERON:0001896,5.94e-07,3;UBERON:0005290,5.94e-07,3;UBERON:0010096,5.94e-07,3;UBERON:0002050,7.66e-07,564;UBERON:0000988,8.68e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0.990130823680373,0.994192127183747,0,0,0,0,0.738726348460727,0,0.313454721478088,6.01095572975219,5.88560027813402,4.3939923858181,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.661743720148475,0.221729397462564,0.175669571386252,1.70272798147026,0,0,0,0,0,2.38490624305342,2.28797964312051,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,1.17160715916898,1.5608003841516,0,1.79338416662161,0.939475989150119,1.29498355494505,0.702254033511242,0.61246251376468,0.122834317311768,2.47981874821837,0,0.494533858557114,0,0,0.673344455816265,1.87677779807946,0.831192346452549,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,4.75697453905422,4.24095258628753,4.29917588617218,3.73179798055334,3.28017106138317,6.20461510428911,0,0,0,1.39310378409594,2.88751792667834,0,0,0.241011029883482,0.110293972732394,0,0,0,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0.325808305310325,0,0,3.94163376915261,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.626909658919938,0,0.383382679165211,0,0.088048434013226,0,0,0,2.41291998310242,2.29193055334967,3.51652341630141,0,2.98199728839638,1.50171528921959,4.85904935471983,0.112131084345361,0.43596006883328,0.66004457238855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,1.43833425785268,0.358121926479791,0,0,0,0,11.6883527142333,13.0139853857622,6.95959931499926,5.86306928670221,4.46557126157214,0,0,0,0.49076596687656,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0.343143423810856,0,0.215714200818617,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,1.07834031980251,0.614014698904518,0.964856007391714,1.07420244868274,2.17525040871343,0.596586391912706,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0.578775534266688,2.62357900818653,0,0,0,0,0,0,0,0,0,0.75894634753143,1.39973888097993,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,2.24330549367694,0.962479855263359,0,0,0.577076851905779,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9297717731956,16.0363134707985,0,0,0.422250816255987,0.19924798825107,0.552567831062295,0,3.78394125257973,0.123084805461069,0,0,0,0,0.197286811273867,0,0,16.4786566836187,11.224939877584,15.9691038400955,0,0,0,0,0,0,0,0.583209226766509,2.2571249341328,11.5146380155799,10.6124865990359,7.62908681585416,7.85112745511695,3.25102380848902,8.7754158861589,0,0.139423744278603,0.230850775511391,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24582959613137,0,0.0884575645033392,1.22206028986725,0,0,0,15.6370628515171,0.802577647298789,19.6782134409285,0,0,0,1.57833761139756,0,7.65181904076225,0.252746318513952,0.450970258243478,0.311064574191741,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,2.48578814858586,0,0,8.6102682499995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2113477951643,13.5536325103073,1.27746588066972,0,0,0.558564802544508,0,0,0,0,0.446342914883745,0.604651252380536,0,0,0,0,0,0,0.169346664131569,17.4950531758047,22.47356200841,2.41129722697529,6.87697182986169,4.56984371832104,0,0,8.99093438538765,0,0.157611414598396,0.262272940674991,0,0,0,0.714695326373367,0,0.76280561296425,0,0,0,0,0.164185041498678,0,0,0,0,21.7195366687405,13.6199579794971,0,0,0.427149650270779,0.628817220398664,0,0,0,0,0,0,0,0,0,0,6.2024772597689,10.006153721961,11.517565624998,14.3352298922518,17.8595772974332,12.4192805882767,0.553394539744923,0.124980407962107,4.85277176133273,2.28372266835974,0,0,1.44921028610825,0,0,0,0.378806010550178,0,0.889811221596536,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.71028147755904,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0.873677105536111,0.169732529954025,0,0.619678821295011,1.67593475391973,0,1.34064966502131,0,0,0,8.22134081234682,7.08482881627925,12.1321732883435,14.5632618610936,11.3432263299773,7.3306687612071,14.3713324612347,15.704636228507,0,0,0,0,0,0.690359926060101,0.198916222116275,0.0752103283492573,0,0,0,0,0,10.6709383697064,7.81078098613847,10.3343398250592,10.6538561125763,6.56369770821863,0,0.992422356778588,0,0,2.67850917939143,1.68141861109412,0,0,0,0,0,7.88448902531248,7.03768677122485,0,0,0.549451649953598,13.8261719126082,0,1.82631744101899,0,0,1.92986669276972,1.89616334079272,0,0.347716544605159,0,0.828864656652147,0.17071847709395,0.6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| |||
|short_description=p4@GPM6B | |||
}} |
Revision as of 04:54, 23 January 2014
Short description: | p4@GPM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GPM6B_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_NM_001001994, uc004cvx.2, uc004cwa.2_5end |
EntrezGene: | GPM6B |
HGNC: | 4461 |
UniProt: | Q13491 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.19e-13 | 8 |
melanocyte | 9.76e-12 | 10 |
melanoblast | 9.76e-12 | 10 |
neuron | 5.10e-10 | 6 |
neuroblast | 5.10e-10 | 6 |
electrically signaling cell | 5.10e-10 | 6 |
neurectodermal cell | 2.82e-09 | 59 |
neural cell | 3.32e-09 | 25 |
embryonic stem cell | 2.01e-08 | 5 |
ectodermal cell | 4.17e-08 | 72 |
pigment cell | 7.30e-08 | 14 |