FFCP PHASE1:Mm9::chr19:24551223..24551242,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=102|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:24551223..24551242,+|id=chr19:24551223..24551242,+|ontology_enrichment_celltype=CL:0000791!4.15e-17!9;CL:0000789!4.15e-17!9;CL:0002420!4.15e-17!9;CL:0002419!4.15e-17!9;CL:0000790!4.15e-17!9;CL:0000838!9.57e-16!12;CL:0000624!4.49e-15!8;CL:0000542!2.22e-14!13;CL:0000051!2.22e-14!13;CL:0000084!1.07e-13!11;CL:0000827!1.07e-13!11;CL:0000893!1.25e-10!6;CL:0002489!1.25e-10!6;CL:0000898!1.25e-10!6;CL:0000809!1.25e-10!6;CL:0000810!1.25e-10!6;CL:0000895!1.25e-10!6;CL:0000808!1.25e-10!6;CL:0000894!1.25e-10!6;CL:0000806!1.25e-10!6;CL:0000807!1.25e-10!6;CL:0000805!1.25e-10!6;CL:0002425!1.25e-10!6;CL:0002436!1.25e-10!6;CL:0002427!1.25e-10!6;CL:0002428!1.25e-10!6;CL:0002429!1.25e-10!6;CL:0002433!1.25e-10!6;CL:0002431!1.25e-10!6;CL:0002432!1.25e-10!6;CL:0000738!1.57e-10!17;CL:0002087!1.57e-10!17;CL:0000988!2.72e-08!32;CL:0002032!2.72e-08!32;CL:0000037!2.72e-08!32;CL:0000566!2.72e-08!32;CL:0000837!2.72e-08!32;CL:0002031!5.81e-08!25|ontology_enrichment_celltype_v019_2=CL:0000624,3.38e-56,8;CL:0000838,9.17e-51,12;CL:0000791,5.11e-50,9;CL:0000789,5.11e-50,9;CL:0002420,5.11e-50,9;CL:0002419,5.11e-50,9;CL:0000790,5.11e-50,9;CL:0000542,6.71e-47,13;CL:0000051,6.71e-47,13;CL:0000084,5.06e-41,11;CL:0000827,5.06e-41,11;CL:0000738,5.59e-36,17;CL:0002087,5.59e-36,17;CL:0000893,9.27e-34,6;CL:0002489,9.27e-34,6;CL:0000898,9.27e-34,6;CL:0000809,9.27e-34,6;CL:0000810,9.27e-34,6;CL:0000895,9.27e-34,6;CL:0000808,9.27e-34,6;CL:0000894,9.27e-34,6;CL:0000806,9.27e-34,6;CL:0000807,9.27e-34,6;CL:0000805,9.27e-34,6;CL:0002425,9.27e-34,6;CL:0002436,9.27e-34,6;CL:0002427,9.27e-34,6;CL:0002428,9.27e-34,6;CL:0002429,9.27e-34,6;CL:0002433,9.27e-34,6;CL:0002431,9.27e-34,6;CL:0002432,9.27e-34,6;CL:0002031,1.35e-24,25;CL:0000988,2.74e-19,32;CL:0002032,2.74e-19,32;CL:0000037,2.74e-19,32;CL:0000837,2.74e-19,32;CL:0000815,3.62e-14,1;CL:0000792,3.62e-14,1;CL:0002320,1.70e-13,46;CL:0000134,1.70e-13,46;CL:0000945,2.06e-13,1;CL:0000236,2.06e-13,1;CL:0000826,2.06e-13,1;CL:0000219,1.59e-11,54;CL:0000723,7.08e-07,91;CL:0000048,7.08e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.70e-13,46;UBERON:0002370,3.24e-09,23;UBERON:0000974,3.24e-09,23;UBERON:0004807,3.24e-09,23;UBERON:0005058,3.24e-09,23;UBERON:0003351,3.24e-09,23;UBERON:0009113,3.24e-09,23;UBERON:0003295,3.24e-09,23;UBERON:0009722,3.24e-09,23;UBERON:0005562,3.24e-09,23;UBERON:0007690,3.24e-09,23;UBERON:0006562,7.53e-09,24;UBERON:0003408,7.53e-09,24;UBERON:0001557,7.53e-09,24;UBERON:0001042,7.53e-09,24;UBERON:0008814,7.53e-09,24;UBERON:0009145,7.53e-09,24;UBERON:0000072,6.52e-08,27;UBERON:0004177,2.15e-07,29;UBERON:0005057,2.15e-07,29|phase1_expression=0,0,0,0,0,0,0,5.29405626110463,4.78681655315667,2.80877431586392,0,0.717949430958028,2.9104124088305,3.67165690159789,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,2.17608642603403,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0.127070227073065,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0,0,0,0.350296027101508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:24551223..24551242,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=102 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:24551223..24551242,+ | |||
|description=CAGE_peak_at_chr19:24551223..24551242,+ | |||
|id=chr19:24551223..24551242,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.15e-17!9;CL:0000789!4.15e-17!9;CL:0002420!4.15e-17!9;CL:0002419!4.15e-17!9;CL:0000790!4.15e-17!9;CL:0000838!9.57e-16!12;CL:0000624!4.49e-15!8;CL:0000542!2.22e-14!13;CL:0000051!2.22e-14!13;CL:0000084!1.07e-13!11;CL:0000827!1.07e-13!11;CL:0000893!1.25e-10!6;CL:0002489!1.25e-10!6;CL:0000898!1.25e-10!6;CL:0000809!1.25e-10!6;CL:0000810!1.25e-10!6;CL:0000895!1.25e-10!6;CL:0000808!1.25e-10!6;CL:0000894!1.25e-10!6;CL:0000806!1.25e-10!6;CL:0000807!1.25e-10!6;CL:0000805!1.25e-10!6;CL:0002425!1.25e-10!6;CL:0002436!1.25e-10!6;CL:0002427!1.25e-10!6;CL:0002428!1.25e-10!6;CL:0002429!1.25e-10!6;CL:0002433!1.25e-10!6;CL:0002431!1.25e-10!6;CL:0002432!1.25e-10!6;CL:0000738!1.57e-10!17;CL:0002087!1.57e-10!17;CL:0000988!2.72e-08!32;CL:0002032!2.72e-08!32;CL:0000037!2.72e-08!32;CL:0000566!2.72e-08!32;CL:0000837!2.72e-08!32;CL:0002031!5.81e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.38e-56,8;CL:0000838,9.17e-51,12;CL:0000791,5.11e-50,9;CL:0000789,5.11e-50,9;CL:0002420,5.11e-50,9;CL:0002419,5.11e-50,9;CL:0000790,5.11e-50,9;CL:0000542,6.71e-47,13;CL:0000051,6.71e-47,13;CL:0000084,5.06e-41,11;CL:0000827,5.06e-41,11;CL:0000738,5.59e-36,17;CL:0002087,5.59e-36,17;CL:0000893,9.27e-34,6;CL:0002489,9.27e-34,6;CL:0000898,9.27e-34,6;CL:0000809,9.27e-34,6;CL:0000810,9.27e-34,6;CL:0000895,9.27e-34,6;CL:0000808,9.27e-34,6;CL:0000894,9.27e-34,6;CL:0000806,9.27e-34,6;CL:0000807,9.27e-34,6;CL:0000805,9.27e-34,6;CL:0002425,9.27e-34,6;CL:0002436,9.27e-34,6;CL:0002427,9.27e-34,6;CL:0002428,9.27e-34,6;CL:0002429,9.27e-34,6;CL:0002433,9.27e-34,6;CL:0002431,9.27e-34,6;CL:0002432,9.27e-34,6;CL:0002031,1.35e-24,25;CL:0000988,2.74e-19,32;CL:0002032,2.74e-19,32;CL:0000037,2.74e-19,32;CL:0000837,2.74e-19,32;CL:0000815,3.62e-14,1;CL:0000792,3.62e-14,1;CL:0002320,1.70e-13,46;CL:0000134,1.70e-13,46;CL:0000945,2.06e-13,1;CL:0000236,2.06e-13,1;CL:0000826,2.06e-13,1;CL:0000219,1.59e-11,54;CL:0000723,7.08e-07,91;CL:0000048,7.08e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.70e-13,46;UBERON:0002370,3.24e-09,23;UBERON:0000974,3.24e-09,23;UBERON:0004807,3.24e-09,23;UBERON:0005058,3.24e-09,23;UBERON:0003351,3.24e-09,23;UBERON:0009113,3.24e-09,23;UBERON:0003295,3.24e-09,23;UBERON:0009722,3.24e-09,23;UBERON:0005562,3.24e-09,23;UBERON:0007690,3.24e-09,23;UBERON:0006562,7.53e-09,24;UBERON:0003408,7.53e-09,24;UBERON:0001557,7.53e-09,24;UBERON:0001042,7.53e-09,24;UBERON:0008814,7.53e-09,24;UBERON:0009145,7.53e-09,24;UBERON:0000072,6.52e-08,27;UBERON:0004177,2.15e-07,29;UBERON:0005057,2.15e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,5.29405626110463,4.78681655315667,2.80877431586392,0,0.717949430958028,2.9104124088305,3.67165690159789,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,2.17608642603403,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0.127070227073065,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0,0,0,0.350296027101508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:24551223..24551242,+ | |||
}} |
Latest revision as of 10:17, 6 August 2015
Short description: | p@chr19:24551223..24551242, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:24551223..24551242, + |
Coexpression cluster: | MCL_coexpression_mm9:102 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.70e-13 | 46 |
thymus | 3.24e-09 | 23 |
neck | 3.24e-09 | 23 |
respiratory system epithelium | 3.24e-09 | 23 |
hemolymphoid system gland | 3.24e-09 | 23 |
pharyngeal epithelium | 3.24e-09 | 23 |
thymic region | 3.24e-09 | 23 |
pharyngeal gland | 3.24e-09 | 23 |
entire pharyngeal arch endoderm | 3.24e-09 | 23 |
thymus primordium | 3.24e-09 | 23 |
early pharyngeal endoderm | 3.24e-09 | 23 |
pharynx | 7.53e-09 | 24 |
gland of gut | 7.53e-09 | 24 |
upper respiratory tract | 7.53e-09 | 24 |
chordate pharynx | 7.53e-09 | 24 |
pharyngeal arch system | 7.53e-09 | 24 |
pharyngeal region of foregut | 7.53e-09 | 24 |
segment of respiratory tract | 6.52e-08 | 27 |
hemopoietic organ | 2.15e-07 | 29 |
immune organ | 2.15e-07 | 29 |