FF:11753-123G7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468 | |DRA_sample_Accession=CAGE@SAMD00005181 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |accession_numbers=CAGE;DRX008552;DRR009424;DRZ000849;DRZ002234;DRZ012199;DRZ013584 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007100,UBERON:0000948,UBERON:0002384,UBERON:0000479,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0010317,UBERON:0004535,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0002494,CL:0000034,CL:0000569 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000271 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr2:19558373..19558392,-!p1@OSR1!1.86!186.62!OSR1;;chr1:170632285..170632309,+!p1@PRRX1!1.71!56.71!PRRX1;;chr20:50179368..50179392,-!p2@NFATC2!1.50!39.47!NFATC2;;chr8:11561684..11561751,+!p1@GATA4!1.50!30.85!GATA4;;chr6:134210243..134210257,+!p1@TCF21!1.50!30.70!TCF21;;chr8:25902876..25902936,-!p1@EBF2!1.42!25.56!EBF2;;chr19:45971246..45971265,+!p1@FOSB!1.36!388.97!FOSB;;chr1:170633348..170633399,+!p2@PRRX1!1.36!29.34!PRRX1;;chr8:22550982..22550999,-!p1@EGR3!1.35!59.43!EGR3;;chr11:46299199..46299233,+!p1@CREB3L1!1.30!95.88!CREB3L1;;chr1:170633262..170633285,+!p3@PRRX1!1.29!21.02!PRRX1;;chr4:174451370..174451387,-!p1@HAND2!1.29!18.60!HAND2;;chr3:141105705..141105770,+!p4@ZBTB38!1.28!21.93!ZBTB38;;chr19:54041669..54041697,+!p2@ZNF331!1.25!16.94!ZNF331;;chr21:36260773..36260804,-!p7@RUNX1!1.21!20.26!RUNX1;;chr7:35293685..35293718,-!p1@TBX20!1.20!14.82!TBX20;;chr4:174450089..174450153,-!p2@HAND2!1.17!13.76!HAND2;;chr12:52445218..52445237,+!p1@NR4A1!1.16!168.62!NR4A1;;chr9:102584159..102584174,+!p2@NR4A3!1.15!23.44!NR4A3;;chr19:13134772..13134822,+!p2@NFIX!1.12!18.15!NFIX;;chr10:64576105..64576133,-!p1@EGR2!1.10!23.74!EGR2;;chr14:75745523..75745537,+!p1@FOS!1.06!1255.37!FOS;;chr3:5021268..5021282,+!p4@BHLHE40!1.06!21.47!BHLHE40;;chr19:54058073..54058088,+!p1@ZNF331!1.06!10.59!ZNF331;;chr15:67430351..67430366,+!p10@SMAD3!1.04!9.98!SMAD3;;chr2:45236540..45236577,-!p1@SIX2!1.02!9.38!SIX2;;chr9:110252035..110252057,-!p1@KLF4!1.01!149.11!KLF4;;chr7:19157248..19157268,-!p1@TWIST1!1.00!25.41!TWIST1;;chr11:46299539..46299620,+!p2@CREB3L1!0.97!14.37!CREB3L1;;chr2:157189180..157189290,-!p1@NR4A2!0.96!43.40!NR4A2;;chr14:75746722..75746777,+!p2@FOS!0.96!10.59!FOS;;chr10:131762504..131762555,-!p1@EBF3!0.96!8.17!EBF3;;chr12:66218598..66218645,+!p2@HMGA2!0.95!38.11!HMGA2;;chr18:19749541..19749557,+!p1@GATA6!0.95!25.56!GATA6;;chr18:19749386..19749404,+!p2@GATA6!0.92!10.59!GATA6;;chr20:51588873..51588953,+!p1@TSHZ2!0.92!9.83!TSHZ2;;chr19:50432453..50432468,+!p1@ATF5!0.91!419.21!ATF5;;chr8:49833948..49833973,-!p2@SNAI2!0.91!47.03!SNAI2;;chr15:42749722..42749739,-!p2@ZFP106!0.89!12.55!ZFP106;;chr2:239756671..239756732,+!p1@TWIST2!0.88!21.93!TWIST2;;chr16:31076332..31076388,-!p3@ZNF668!0.88!6.65!ZNF668;;chr17:1959369..1959388,+!p2@HIC1!0.86!17.39!HIC1;;chr19:16435523..16435619,+!p2@KLF2!0.86!8.77!KLF2;;chr1:170632959..170632987,+!p4@PRRX1!0.84!6.50!PRRX1;;chr15:67418177..67418204,+!p9@SMAD3!0.84!5.90!SMAD3;;chr10:63809106..63809127,+!p1@ARID5B!0.83!83.03!ARID5B;;chr11:65687362..65687436,+!p3@DRAP1!0.83!27.98!DRAP1;;chr8:49833978..49833996,-!p1@SNAI2!0.82!123.25!SNAI2;;chr5:92918919..92918942,+!p1@NR2F1!0.80!25.26!NR2F1;;chr12:66218255..66218304,+!p3@HMGA2!0.80!15.12!HMGA2;;chr9:102584262..102584276,+!p1@NR4A3!0.80!12.40!NR4A3;;chr9:16870710..16870763,-!p1@BNC2!0.80!9.53!BNC2;;chr1:158979872..158979898,+!p3@IFI16!0.79!17.24!IFI16;;chr9:16870659..16870675,-!p2@BNC2!0.79!6.50!BNC2;;chr1:170632477..170632506,+!p6@PRRX1!0.79!5.14!PRRX1;;chr1:170632683..170632696,+!p12@PRRX1!0.79!5.14!PRRX1;;chr1:170632723..170632739,+!p8@PRRX1!0.79!5.14!PRRX1;;chr12:72056800..72056834,+!p1@THAP2!0.78!6.96!THAP2;;chr19:13135386..13135435,+!p4@NFIX!0.77!4.84!NFIX;;chr2:19558327..19558334,-!p2@OSR1!0.77!4.84!OSR1;;chr17:1958388..1958404,+!p1@HIC1!0.76!33.12!HIC1;;chr1:59249688..59249703,-!p3@JUN!0.76!31.46!JUN;;chr5:137804484..137804498,+!p2@EGR1!0.76!20.72!EGR1;;chr1:158985493..158985535,+!p4@IFI16!0.75!7.41!IFI16;;chr7:19157043..19157088,-!p2@TWIST1!0.74!12.10!TWIST1;;chr1:164528911..164528940,+!p7@PBX1!0.74!6.96!PBX1;;chr3:157823517..157823562,-!p1@SHOX2!0.74!4.84!SHOX2;;chr2:102091144..102091183,-!p2@RFX8!0.74!4.54!RFX8;;chr1:170632250..170632277,+!p7@PRRX1!0.74!4.54!PRRX1;;chr11:65686732..65686756,+!p2@DRAP1!0.73!20.42!DRAP1;;chr19:50435736..50435781,+!p3@ATF5!0.73!6.20!ATF5;;chr1:170632647..170632659,+!p17@PRRX1!0.73!4.39!PRRX1;;chr2:102091566..102091581,-!p1@RFX8!0.73!4.39!RFX8;;chr15:67458491..67458505,+!p18@SMAD3!0.72!4.23!SMAD3;;chr1:170632137..170632172,+!p10@PRRX1!0.72!4.23!PRRX1;;chr3:141087393..141087426,+!p3@ZBTB38!0.71!18.15!ZBTB38;;chr3:12329397..12329433,+!p2@PPARG!0.71!10.28!PPARG;;chr3:25470156..25470227,+!p2@RARB!0.71!4.08!RARB;;chr1:170633058..170633084,+!p5@PRRX1!0.71!4.08!PRRX1;;chr11:46299443..46299459,+!p4@CREB3L1!0.71!4.08!CREB3L1;;chr14:62162258..62162269,+!p2@HIF1A!0.70!44.01!HIF1A;;chr2:145275162..145275202,-!p2@ZEB2!0.70!26.62!ZEB2;;chr12:53614115..53614154,-!p1@RARG!0.70!24.05!RARG;;chr17:46655704..46655718,-!p2@HOXB4!0.70!6.35!HOXB4;;chr8:106330656..106330684,+!p1@ZFPM2!0.69!11.34!ZFPM2;;chr15:67418047..67418093,+!p4@SMAD3!0.69!5.14!SMAD3;;chr15:67418119..67418162,+!p5@SMAD3!0.69!4.39!SMAD3;;chr1:170633245..170633256,+!p14@PRRX1!0.69!3.93!PRRX1;;chr10:63809077..63809089,+!p5@ARID5B!0.68!8.92!ARID5B;;chr6:85474299..85474324,-!p1@TBX18!0.68!7.26!TBX18;;chr15:67430381..67430396,+!p21@SMAD3!0.68!3.78!SMAD3;;chr3:141087454..141087465,+!p19@ZBTB38!0.68!3.78!ZBTB38;;chr1:158979792..158979814,+!p2@IFI16!0.67!40.38!IFI16;;chr14:62162285..62162296,+!p3@HIF1A!0.67!21.63!HIF1A;;chr9:16705069..16705086,-!p3@BNC2!0.67!3.63!BNC2;;chr7:44143978..44143989,+!p2@AEBP1!0.66!7.11!AEBP1;;chr1:158969752..158969780,+!p6@IFI16!0.66!6.81!IFI16;;chr19:13106214..13106382,+!p1@NFIX!0.65!93.91!NFIX;;chr7:44143925..44143970,+!p1@AEBP1!0.65!90.13!AEBP1;;chr16:79633894..79633954,-!p3@MAF!0.65!7.26!MAF;;chr8:72756667..72756736,-!p2@MSC!0.65!5.75!MSC;;chr19:13136130..13136165,+!p6@NFIX!0.65!4.84!NFIX;;chr1:170632115..170632136,+!p9@PRRX1!0.65!3.48!PRRX1;;chr4:174451350..174451363,-!p3@HAND2!0.65!3.48!HAND2;;chr9:102584241..102584261,+!p4@NR4A3!0.64!5.60!NR4A3;;chr9:110251836..110251887,-!p4@KLF4!0.64!4.69!KLF4;;chr1:170632310..170632321,+!p15@PRRX1!0.64!3.33!PRRX1;;chr1:44513995..44514031,+!p1@KLF17!0.64!3.33!KLF17;;chr22:38598086..38598105,+!p1@MAFF!0.63!40.98!MAFF;;chr5:92918956..92918969,+!p4@NR2F1!0.63!3.63!NR2F1;;chr5:137801160..137801176,+!p1@EGR1!0.62!381.71!EGR1;;chr1:164528410..164528428,+!p1@PBX1!0.62!28.28!PBX1;;chr15:96873984..96873999,+!p3@NR2F2!0.62!27.22!NR2F2;;chr6:19837592..19837621,+!p1@ID4!0.62!22.99!ID4;;chr10:63809134..63809145,+!p6@ARID5B!0.62!8.17!ARID5B;;chr2:239756739..239756755,+!p2@TWIST2!0.62!5.90!TWIST2;;chr1:170632439..170632465,+!p11@PRRX1!0.62!3.18!PRRX1;;chr15:67458861..67458879,+!p17@SMAD3!0.62!3.18!SMAD3;;chr17:46132044..46132080,+!p4@NFE2L1!0.62!3.18!NFE2L1;;chr19:13135582..13135600,+!p3@NFIX!0.62!3.18!NFIX;;chr13:41635067..41635100,-!p5@ELF1!0.61!6.35!ELF1;;chr3:114343768..114343822,-!p1@ZBTB20!0.60!15.58!ZBTB20;;chr17:59477233..59477263,+!p1@TBX2!0.60!10.74!TBX2;;chr8:72756267..72756296,-!p4@MSC!0.60!4.69!MSC;;chr6:85473156..85473210,-!p2@TBX18!0.60!3.78!TBX18;;chr8:72756637..72756664,-!p3@MSC!0.60!3.48!MSC;;chr11:46333934..46333963,+!p5@CREB3L1!0.60!3.02!CREB3L1;;chr14:29235961..29236008,+!p1@FOXG1!0.60!3.02!FOXG1;;chr2:45236579..45236596,-!p2@SIX2!0.60!3.02!SIX2;;chr1:170633194..170633205,+!p18@PRRX1!0.60!3.02!PRRX1;;chr1:158979851..158979865,+!p5@IFI16!0.59!7.26!IFI16;;chr13:45151403..45151433,-!p5@TSC22D1!0.59!7.26!TSC22D1;;chr9:110250697..110250738,-!p2@KLF4!0.59!3.48!KLF4;;chr17:46621279..46621297,-!p13@HOXB2!0.59!2.87!HOXB2;;chr12:66218836..66218888,+!p1@HMGA2!0.58!32.21!HMGA2;;chr15:67357924..67357952,+!p2@SMAD3!0.58!22.68!SMAD3;;chr15:37391271..37391376,-!p5@MEIS2!0.58!5.90!MEIS2;;chr15:96869255..96869291,+!p6@NR2F2!0.58!5.75!NR2F2;;chr17:38256799..38256815,-!p3@NR1D1!0.58!5.60!NR1D1;;chr1:221052776..221052799,+!p1@HLX!0.58!5.60!HLX;;chr1:151043070..151043110,+!p3@GABPB2!0.58!4.99!GABPB2;;chr3:12330560..12330579,+!p1@PPARG!0.58!3.33!PPARG;;chr9:73029219..73029289,-!p2@KLF9!0.57!9.68!KLF9;;chr6:15246200..15246214,+!p2@JARID2!0.57!8.77!JARID2;;chr14:24837368..24837401,+!p1@NFATC4!0.57!7.41!NFATC4;;chr9:94186085..94186096,-!p3@NFIL3!0.57!4.99!NFIL3;;chr17:15689487..15689505,+!p@chr17:15689487..15689505,+!0.57!4.99!MEIS3P1;;chr7:44143997..44144008,+!p3@AEBP1!0.57!3.63!AEBP1;;chr7:1577899..1577943,+!p3@MAFK!0.57!2.72!MAFK;;chr1:40105299..40105326,-!p1@HEYL!0.57!2.72!HEYL;;chr9:4300050..4300118,-!p1@GLIS3!0.56!20.87!GLIS3;;chr7:28448965..28448994,+!p2@CREB5!0.56!11.04!CREB5;;chr18:3450293..3450304,+!p4@TGIF1!0.56!7.56!TGIF1;;chr19:12902289..12902307,+!p1@JUNB!0.55!741.33!JUNB;;chr17:38256822..38256851,-!p1@NR1D1!0.55!25.26!NR1D1;;chr11:65687158..65687216,+!p4@DRAP1!0.55!18.00!DRAP1;;chr16:79634624..79634642,-!p1@MAF!0.55!12.25!MAF;;chr17:46622070..46622109,-!p1@HOXB2!0.55!6.65!HOXB2;;chr15:96874927..96874938,+!p8@NR2F2!0.55!6.35!NR2F2;;chr8:72756213..72756243,-!p5@MSC!0.55!3.48!MSC;;chr8:128747846..128747860,+!p15@MYC!0.55!2.57!MYC;;chr12:66218923..66218934,+!p14@HMGA2!0.55!2.57!HMGA2;;chr7:14029283..14029311,-!p1@ETV1!0.54!16.48!ETV1;;chr20:42543441..42543497,+!p1@TOX2!0.54!13.76!TOX2;;chr15:96874216..96874236,+!p13@NR2F2!0.54!4.23!NR2F2;;chr17:46621101..46621143,-!p7@HOXB2!0.54!3.63!HOXB2;;chr19:13134457..13134462,+!p5@NFIX!0.53!4.84!NFIX;;chr11:46299186..46299195,+!p3@CREB3L1!0.53!2.72!CREB3L1;;chr3:21792585..21792625,-!p2@ZNF385D!0.53!2.72!ZNF385D;;chr17:46621146..46621180,-!p10@HOXB2!0.53!2.42!HOXB2;;chr9:14314566..14314618,-!p1@NFIB!0.52!35.99!NFIB;;chr12:66218183..66218209,+!p4@HMGA2!0.52!5.14!HMGA2;;chr15:96874145..96874166,+!p7@NR2F2!0.52!5.14!NR2F2;;chr18:19749517..19749531,+!p3@GATA6!0.52!4.69!GATA6;;chr1:212782094..212782109,+!p1@ATF3!0.51!81.06!ATF3;;chr6:144329384..144329405,-!p1@PLAGL1!0.51!33.57!PLAGL1;;chr3:187463220..187463232,-!p3@BCL6!0.51!8.17!BCL6;;chr3:5021191..5021202,+!p3@BHLHE40!0.51!7.26!BHLHE40;;chr3:25469724..25469773,+!p1@RARB!0.51!3.63!RARB;;chr9:132427972..132428056,+!p1@PRRX2!0.51!3.18!PRRX2;;chr3:21792682..21792720,-!p1@ZNF385D!0.51!2.27!ZNF385D;;chr1:170632051..170632081,+!p16@PRRX1!0.51!2.27!PRRX1;;chr12:10870927..10870966,-!p5@CSDA!0.51!2.27!CSDA;;chr2:208394817..208394834,+!p3@CREB1!0.50!11.04!CREB1;;chr9:110252074..110252079,-!p3@KLF4!0.50!4.08!KLF4;;chr3:178789522..178789564,-!p2@ZMAT3!0.49!20.11!ZMAT3;;chr13:41635029..41635044,-!p4@ELF1!0.49!5.29!ELF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| |expression_enrichment_score=chr2:19558373..19558392,-!p1@OSR1!1.86!186.62!OSR1;;chr1:170632285..170632309,+!p1@PRRX1!1.71!56.71!PRRX1;;chr20:50179368..50179392,-!p2@NFATC2!1.50!39.47!NFATC2;;chr8:11561684..11561751,+!p1@GATA4!1.50!30.85!GATA4;;chr6:134210243..134210257,+!p1@TCF21!1.50!30.70!TCF21;;chr8:25902876..25902936,-!p1@EBF2!1.42!25.56!EBF2;;chr19:45971246..45971265,+!p1@FOSB!1.36!388.97!FOSB;;chr1:170633348..170633399,+!p2@PRRX1!1.36!29.34!PRRX1;;chr8:22550982..22550999,-!p1@EGR3!1.35!59.43!EGR3;;chr11:46299199..46299233,+!p1@CREB3L1!1.30!95.88!CREB3L1;;chr1:170633262..170633285,+!p3@PRRX1!1.29!21.02!PRRX1;;chr4:174451370..174451387,-!p1@HAND2!1.29!18.60!HAND2;;chr3:141105705..141105770,+!p4@ZBTB38!1.28!21.93!ZBTB38;;chr19:54041669..54041697,+!p2@ZNF331!1.25!16.94!ZNF331;;chr21:36260773..36260804,-!p7@RUNX1!1.21!20.26!RUNX1;;chr7:35293685..35293718,-!p1@TBX20!1.20!14.82!TBX20;;chr4:174450089..174450153,-!p2@HAND2!1.17!13.76!HAND2;;chr12:52445218..52445237,+!p1@NR4A1!1.16!168.62!NR4A1;;chr9:102584159..102584174,+!p2@NR4A3!1.15!23.44!NR4A3;;chr19:13134772..13134822,+!p2@NFIX!1.12!18.15!NFIX;;chr10:64576105..64576133,-!p1@EGR2!1.10!23.74!EGR2;;chr14:75745523..75745537,+!p1@FOS!1.06!1255.37!FOS;;chr3:5021268..5021282,+!p4@BHLHE40!1.06!21.47!BHLHE40;;chr19:54058073..54058088,+!p1@ZNF331!1.06!10.59!ZNF331;;chr15:67430351..67430366,+!p10@SMAD3!1.04!9.98!SMAD3;;chr2:45236540..45236577,-!p1@SIX2!1.02!9.38!SIX2;;chr9:110252035..110252057,-!p1@KLF4!1.01!149.11!KLF4;;chr7:19157248..19157268,-!p1@TWIST1!1.00!25.41!TWIST1;;chr11:46299539..46299620,+!p2@CREB3L1!0.97!14.37!CREB3L1;;chr2:157189180..157189290,-!p1@NR4A2!0.96!43.40!NR4A2;;chr14:75746722..75746777,+!p2@FOS!0.96!10.59!FOS;;chr10:131762504..131762555,-!p1@EBF3!0.96!8.17!EBF3;;chr12:66218598..66218645,+!p2@HMGA2!0.95!38.11!HMGA2;;chr18:19749541..19749557,+!p1@GATA6!0.95!25.56!GATA6;;chr18:19749386..19749404,+!p2@GATA6!0.92!10.59!GATA6;;chr20:51588873..51588953,+!p1@TSHZ2!0.92!9.83!TSHZ2;;chr19:50432453..50432468,+!p1@ATF5!0.91!419.21!ATF5;;chr8:49833948..49833973,-!p2@SNAI2!0.91!47.03!SNAI2;;chr15:42749722..42749739,-!p2@ZFP106!0.89!12.55!ZFP106;;chr2:239756671..239756732,+!p1@TWIST2!0.88!21.93!TWIST2;;chr16:31076332..31076388,-!p3@ZNF668!0.88!6.65!ZNF668;;chr17:1959369..1959388,+!p2@HIC1!0.86!17.39!HIC1;;chr19:16435523..16435619,+!p2@KLF2!0.86!8.77!KLF2;;chr1:170632959..170632987,+!p4@PRRX1!0.84!6.50!PRRX1;;chr15:67418177..67418204,+!p9@SMAD3!0.84!5.90!SMAD3;;chr10:63809106..63809127,+!p1@ARID5B!0.83!83.03!ARID5B;;chr11:65687362..65687436,+!p3@DRAP1!0.83!27.98!DRAP1;;chr8:49833978..49833996,-!p1@SNAI2!0.82!123.25!SNAI2;;chr5:92918919..92918942,+!p1@NR2F1!0.80!25.26!NR2F1;;chr12:66218255..66218304,+!p3@HMGA2!0.80!15.12!HMGA2;;chr9:102584262..102584276,+!p1@NR4A3!0.80!12.40!NR4A3;;chr9:16870710..16870763,-!p1@BNC2!0.80!9.53!BNC2;;chr1:158979872..158979898,+!p3@IFI16!0.79!17.24!IFI16;;chr9:16870659..16870675,-!p2@BNC2!0.79!6.50!BNC2;;chr1:170632477..170632506,+!p6@PRRX1!0.79!5.14!PRRX1;;chr1:170632683..170632696,+!p12@PRRX1!0.79!5.14!PRRX1;;chr1:170632723..170632739,+!p8@PRRX1!0.79!5.14!PRRX1;;chr12:72056800..72056834,+!p1@THAP2!0.78!6.96!THAP2;;chr19:13135386..13135435,+!p4@NFIX!0.77!4.84!NFIX;;chr2:19558327..19558334,-!p2@OSR1!0.77!4.84!OSR1;;chr17:1958388..1958404,+!p1@HIC1!0.76!33.12!HIC1;;chr1:59249688..59249703,-!p3@JUN!0.76!31.46!JUN;;chr5:137804484..137804498,+!p2@EGR1!0.76!20.72!EGR1;;chr1:158985493..158985535,+!p4@IFI16!0.75!7.41!IFI16;;chr7:19157043..19157088,-!p2@TWIST1!0.74!12.10!TWIST1;;chr1:164528911..164528940,+!p7@PBX1!0.74!6.96!PBX1;;chr3:157823517..157823562,-!p1@SHOX2!0.74!4.84!SHOX2;;chr2:102091144..102091183,-!p2@RFX8!0.74!4.54!RFX8;;chr1:170632250..170632277,+!p7@PRRX1!0.74!4.54!PRRX1;;chr11:65686732..65686756,+!p2@DRAP1!0.73!20.42!DRAP1;;chr19:50435736..50435781,+!p3@ATF5!0.73!6.20!ATF5;;chr1:170632647..170632659,+!p17@PRRX1!0.73!4.39!PRRX1;;chr2:102091566..102091581,-!p1@RFX8!0.73!4.39!RFX8;;chr15:67458491..67458505,+!p18@SMAD3!0.72!4.23!SMAD3;;chr1:170632137..170632172,+!p10@PRRX1!0.72!4.23!PRRX1;;chr3:141087393..141087426,+!p3@ZBTB38!0.71!18.15!ZBTB38;;chr3:12329397..12329433,+!p2@PPARG!0.71!10.28!PPARG;;chr3:25470156..25470227,+!p2@RARB!0.71!4.08!RARB;;chr1:170633058..170633084,+!p5@PRRX1!0.71!4.08!PRRX1;;chr11:46299443..46299459,+!p4@CREB3L1!0.71!4.08!CREB3L1;;chr14:62162258..62162269,+!p2@HIF1A!0.70!44.01!HIF1A;;chr2:145275162..145275202,-!p2@ZEB2!0.70!26.62!ZEB2;;chr12:53614115..53614154,-!p1@RARG!0.70!24.05!RARG;;chr17:46655704..46655718,-!p2@HOXB4!0.70!6.35!HOXB4;;chr8:106330656..106330684,+!p1@ZFPM2!0.69!11.34!ZFPM2;;chr15:67418047..67418093,+!p4@SMAD3!0.69!5.14!SMAD3;;chr15:67418119..67418162,+!p5@SMAD3!0.69!4.39!SMAD3;;chr1:170633245..170633256,+!p14@PRRX1!0.69!3.93!PRRX1;;chr10:63809077..63809089,+!p5@ARID5B!0.68!8.92!ARID5B;;chr6:85474299..85474324,-!p1@TBX18!0.68!7.26!TBX18;;chr15:67430381..67430396,+!p21@SMAD3!0.68!3.78!SMAD3;;chr3:141087454..141087465,+!p19@ZBTB38!0.68!3.78!ZBTB38;;chr1:158979792..158979814,+!p2@IFI1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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000034;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000134;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000569;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002494;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000948 | |||
|ffid_belonging_in_development=CL:0000133,CL:0000134,CL:0000011,CL:0000221 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor2.CNhs12369.11753-123G7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor2.CNhs12369.11753-123G7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor2.CNhs12369.11753-123G7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor2.CNhs12369.11753-123G7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor2.CNhs12369.11753-123G7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11753-123G7 | |id=FF:11753-123G7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000271 | ||
|is_obsolete= | |||
|library_id=CNhs12369 | |||
|library_id_phase_based=2:CNhs12369 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11753 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11753 | |||
|name=mesenchymal precursor cell - cardiac, donor2 | |name=mesenchymal precursor cell - cardiac, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12369,LSID914,release011,COMPLETED | |profile_hcage=CNhs12369,LSID914,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=123 | |rna_box=123 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=41.62425 | |rna_weight_ug=41.62425 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 77: | Line 100: | ||
|sample_tissue=heart | |sample_tissue=heart | ||
|top_motifs=ALX4:1.81388521006;XBP1:1.53869708896;TAL1_TCF{3,4,12}:1.52434032796;ESR1:1.38265883139;RXRA_VDR{dimer}:1.35411706469;UFEwm:1.29635504607;EBF1:1.27696240811;HOX{A5,B5}:1.25881465185;bHLH_family:1.24524401531;HOX{A4,D4}:1.2070836302;PAX1,9:1.202695718;MAFB:1.1971819692;RXR{A,B,G}:1.1599115754;EN1,2:1.13992849415;ZNF238:1.10046454776;NKX2-2,8:1.04328046169;HIF1A:1.01135230878;EVI1:1.0112031931;IKZF1:1.00437776042;TBX4,5:0.992594346703;TLX1..3_NFIC{dimer}:0.992062143634;HSF1,2:0.952197324479;TEAD1:0.9463023723;ATF6:0.945069392084;GLI1..3:0.927291820496;HES1:0.899504582017;SRF:0.894218455667;GFI1B:0.893337747898;GZF1:0.828391545072;KLF4:0.806263199377;NFE2L2:0.769464894209;POU3F1..4:0.75000992387;AIRE:0.734340123684;HMX1:0.728613713927;HLF:0.724364528889;STAT2,4,6:0.711170875863;LHX3,4:0.697881219148;NKX3-1:0.687878358995;NFE2L1:0.675515606965;NFATC1..3:0.674962355546;NKX2-1,4:0.657262372751;NKX3-2:0.655539880179;TFCP2:0.640393148973;GTF2I:0.62443459849;PAX4:0.558614326743;MYBL2:0.54884097881;PRDM1:0.544488352794;ZIC1..3:0.527879804367;SPZ1:0.523652417238;HAND1,2:0.514511795353;EGR1..3:0.477568588943;SMAD1..7,9:0.447718937818;GATA4:0.436757662804;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.421044788943;ESRRA:0.419665095621;NR3C1:0.41808407779;GCM1,2:0.415625716083;AHR_ARNT_ARNT2:0.406980147663;FOS_FOS{B,L1}_JUN{B,D}:0.370662632762;TP53:0.363836529575;ZBTB6:0.36213362198;ZNF423:0.360768094193;RFX1:0.3578329865;NFIX:0.347488802541;TFAP4:0.346987442297;PATZ1:0.341392016369;TOPORS:0.338592830424;TFAP2B:0.332443041333;SREBF1,2:0.331959654005;EP300:0.32165296065;RREB1:0.313929129619;PAX5:0.312685276773;NHLH1,2:0.303445216675;GTF2A1,2:0.28979370137;ZNF384:0.271536257517;MAZ:0.267324009631;HIC1:0.265736770338;STAT5{A,B}:0.248482757319;NR6A1:0.242003502904;DBP:0.240895389796;TEF:0.238524460376;FOXM1:0.236717491951;XCPE1{core}:0.227802859206;BACH2:0.208814234374;ZFP161:0.198183180784;FOSL2:0.190987987774;ZNF148:0.183294887695;ZBTB16:0.178319258338;MTE{core}:0.174528108157;MEF2{A,B,C,D}:0.173979753042;AR:0.172806736368;IRF1,2:0.16780941946;FOXL1:0.159970064677;ATF5_CREB3:0.154078985098;CREB1:0.136094788389;CEBPA,B_DDIT3:0.13136433975;NFE2:0.125545391112;TFAP2{A,C}:0.110516279219;MYFfamily:0.106865877087;BPTF:0.0852901939942;MZF1:0.0626870772568;HNF1A:0.0582291110848;PAX8:0.0516983942663;TBP:0.0493072258515;YY1:0.041913489968;PAX6:0.035462358281;SOX17:0.0338263899144;LEF1_TCF7_TCF7L1,2:0.0203025743448;FOXP3:0.0094506369471;VSX1,2:-0.00247048162314;PAX2:-0.0112896208789;NANOG{mouse}:-0.0136303877537;ELK1,4_GABP{A,B1}:-0.0157305903349;JUN:-0.0196518027084;FOX{I1,J2}:-0.0248557214051;FOXO1,3,4:-0.0293183132147;NKX6-1,2:-0.0386670073643;CDC5L:-0.0642089431338;ATF2:-0.0935788952151;ATF4:-0.103445087323;SP1:-0.113828704604;NRF1:-0.122214841229;STAT1,3:-0.125738184961;ONECUT1,2:-0.126700432731;ARID5B:-0.129653815388;TLX2:-0.132327945403;RORA:-0.140468772402;NR1H4:-0.150813442582;RUNX1..3:-0.163595217494;HNF4A_NR2F1,2:-0.192065393328;NFKB1_REL_RELA:-0.201790578265;FOXD3:-0.209796904658;HBP1_HMGB_SSRP1_UBTF:-0.213159162487;LMO2:-0.216903617833;ZNF143:-0.222597530826;HMGA1,2:-0.235737866653;MED-1{core}:-0.251799402915;POU6F1:-0.264184681961;REST:-0.289408820221;POU1F1:-0.296005052059;TFDP1:-0.311722257587;CDX1,2,4:-0.325826328251;MTF1:-0.330729736513;RFX2..5_RFXANK_RFXAP:-0.354939718935;IRF7:-0.372134957663;NFIL3:-0.372949107373;FOX{D1,D2}:-0.373037922962;GFI1:-0.398021505888;MYB:-0.425358426633;PRRX1,2:-0.437583703252;PAX3,7:-0.451179720126;TGIF1:-0.469199526557;ADNP_IRX_SIX_ZHX:-0.49675646408;SPI1:-0.51186217972;CRX:-0.53337541998;SOX2:-0.533725395318;PBX1:-0.554083330855;ETS1,2:-0.555808289969;ELF1,2,4:-0.560034144452;NR5A1,2:-0.575619824978;E2F1..5:-0.587584810929;HOX{A6,A7,B6,B7}:-0.599036395764;FOXA2:-0.605583434315;FOXP1:-0.626022536927;PPARG:-0.628176733864;POU5F1:-0.631095930704;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.646546939246;ALX1:-0.647233531586;BREu{core}:-0.649857056349;GATA6:-0.650018911839;SPIB:-0.698894695567;FOXN1:-0.743143045554;RBPJ:-0.757367203082;NFY{A,B,C}:-0.763184549787;DMAP1_NCOR{1,2}_SMARC:-0.807746175164;FOXQ1:-0.843116801088;MYOD1:-0.862167460844;SOX{8,9,10}:-0.889997072358;SNAI1..3:-0.956909638553;NKX2-3_NKX2-5:-0.971111795875;CUX2:-1.03919452991;ZEB1:-1.04715304658;HOXA9_MEIS1:-1.04843809271;OCT4_SOX2{dimer}:-1.06293605235;T:-1.06591853614;NANOG:-1.07245812535;SOX5:-1.08389969375;PDX1:-1.2035290551;PITX1..3:-1.25077162497;FOX{F1,F2,J1}:-1.3353626437;POU2F1..3:-1.42523708218;IKZF2:-1.45330601371 | |top_motifs=ALX4:1.81388521006;XBP1:1.53869708896;TAL1_TCF{3,4,12}:1.52434032796;ESR1:1.38265883139;RXRA_VDR{dimer}:1.35411706469;UFEwm:1.29635504607;EBF1:1.27696240811;HOX{A5,B5}:1.25881465185;bHLH_family:1.24524401531;HOX{A4,D4}:1.2070836302;PAX1,9:1.202695718;MAFB:1.1971819692;RXR{A,B,G}:1.1599115754;EN1,2:1.13992849415;ZNF238:1.10046454776;NKX2-2,8:1.04328046169;HIF1A:1.01135230878;EVI1:1.0112031931;IKZF1:1.00437776042;TBX4,5:0.992594346703;TLX1..3_NFIC{dimer}:0.992062143634;HSF1,2:0.952197324479;TEAD1:0.9463023723;ATF6:0.945069392084;GLI1..3:0.927291820496;HES1:0.899504582017;SRF:0.894218455667;GFI1B:0.893337747898;GZF1:0.828391545072;KLF4:0.806263199377;NFE2L2:0.769464894209;POU3F1..4:0.75000992387;AIRE:0.734340123684;HMX1:0.728613713927;HLF:0.724364528889;STAT2,4,6:0.711170875863;LHX3,4:0.697881219148;NKX3-1:0.687878358995;NFE2L1:0.675515606965;NFATC1..3:0.674962355546;NKX2-1,4:0.657262372751;NKX3-2:0.655539880179;TFCP2:0.640393148973;GTF2I:0.62443459849;PAX4:0.558614326743;MYBL2:0.54884097881;PRDM1:0.544488352794;ZIC1..3:0.527879804367;SPZ1:0.523652417238;HAND1,2:0.514511795353;EGR1..3:0.477568588943;SMAD1..7,9:0.447718937818;GATA4:0.436757662804;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.421044788943;ESRRA:0.419665095621;NR3C1:0.41808407779;GCM1,2:0.415625716083;AHR_ARNT_ARNT2:0.406980147663;FOS_FOS{B,L1}_JUN{B,D}:0.370662632762;TP53:0.363836529575;ZBTB6:0.36213362198;ZNF423:0.360768094193;RFX1:0.3578329865;NFIX:0.347488802541;TFAP4:0.346987442297;PATZ1:0.341392016369;TOPORS:0.338592830424;TFAP2B:0.332443041333;SREBF1,2:0.331959654005;EP300:0.32165296065;RREB1:0.313929129619;PAX5:0.312685276773;NHLH1,2:0.303445216675;GTF2A1,2:0.28979370137;ZNF384:0.271536257517;MAZ:0.267324009631;HIC1:0.265736770338;STAT5{A,B}:0.248482757319;NR6A1:0.242003502904;DBP:0.240895389796;TEF:0.238524460376;FOXM1:0.236717491951;XCPE1{core}:0.227802859206;BACH2:0.208814234374;ZFP161:0.198183180784;FOSL2:0.190987987774;ZNF148:0.183294887695;ZBTB16:0.178319258338;MTE{core}:0.174528108157;MEF2{A,B,C,D}:0.173979753042;AR:0.172806736368;IRF1,2:0.16780941946;FOXL1:0.159970064677;ATF5_CREB3:0.154078985098;CREB1:0.136094788389;CEBPA,B_DDIT3:0.13136433975;NFE2:0.125545391112;TFAP2{A,C}:0.110516279219;MYFfamily:0.106865877087;BPTF:0.0852901939942;MZF1:0.0626870772568;HNF1A:0.0582291110848;PAX8:0.0516983942663;TBP:0.0493072258515;YY1:0.041913489968;PAX6:0.035462358281;SOX17:0.0338263899144;LEF1_TCF7_TCF7L1,2:0.0203025743448;FOXP3:0.0094506369471;VSX1,2:-0.00247048162314;PAX2:-0.0112896208789;NANOG{mouse}:-0.0136303877537;ELK1,4_GABP{A,B1}:-0.0157305903349;JUN:-0.0196518027084;FOX{I1,J2}:-0.0248557214051;FOXO1,3,4:-0.0293183132147;NKX6-1,2:-0.0386670073643;CDC5L:-0.0642089431338;ATF2:-0.0935788952151;ATF4:-0.103445087323;SP1:-0.113828704604;NRF1:-0.122214841229;STAT1,3:-0.125738184961;ONECUT1,2:-0.126700432731;ARID5B:-0.129653815388;TLX2:-0.132327945403;RORA:-0.140468772402;NR1H4:-0.150813442582;RUNX1..3:-0.163595217494;HNF4A_NR2F1,2:-0.192065393328;NFKB1_REL_RELA:-0.201790578265;FOXD3:-0.209796904658;HBP1_HMGB_SSRP1_UBTF:-0.213159162487;LMO2:-0.216903617833;ZNF143:-0.222597530826;HMGA1,2:-0.235737866653;MED-1{core}:-0.251799402915;POU6F1:-0.264184681961;REST:-0.289408820221;POU1F1:-0.296005052059;TFDP1:-0.311722257587;CDX1,2,4:-0.325826328251;MTF1:-0.330729736513;RFX2..5_RFXANK_RFXAP:-0.354939718935;IRF7:-0.372134957663;NFIL3:-0.372949107373;FOX{D1,D2}:-0.373037922962;GFI1:-0.398021505888;MYB:-0.425358426633;PRRX1,2:-0.437583703252;PAX3,7:-0.451179720126;TGIF1:-0.469199526557;ADNP_IRX_SIX_ZHX:-0.49675646408;SPI1:-0.51186217972;CRX:-0.53337541998;SOX2:-0.533725395318;PBX1:-0.554083330855;ETS1,2:-0.555808289969;ELF1,2,4:-0.560034144452;NR5A1,2:-0.575619824978;E2F1..5:-0.587584810929;HOX{A6,A7,B6,B7}:-0.599036395764;FOXA2:-0.605583434315;FOXP1:-0.626022536927;PPARG:-0.628176733864;POU5F1:-0.631095930704;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.646546939246;ALX1:-0.647233531586;BREu{core}:-0.649857056349;GATA6:-0.650018911839;SPIB:-0.698894695567;FOXN1:-0.743143045554;RBPJ:-0.757367203082;NFY{A,B,C}:-0.763184549787;DMAP1_NCOR{1,2}_SMARC:-0.807746175164;FOXQ1:-0.843116801088;MYOD1:-0.862167460844;SOX{8,9,10}:-0.889997072358;SNAI1..3:-0.956909638553;NKX2-3_NKX2-5:-0.971111795875;CUX2:-1.03919452991;ZEB1:-1.04715304658;HOXA9_MEIS1:-1.04843809271;OCT4_SOX2{dimer}:-1.06293605235;T:-1.06591853614;NANOG:-1.07245812535;SOX5:-1.08389969375;PDX1:-1.2035290551;PITX1..3:-1.25077162497;FOX{F1,F2,J1}:-1.3353626437;POU2F1..3:-1.42523708218;IKZF2:-1.45330601371 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11753-123G7;search_select_hide=table117:FF:11753-123G7 | |||
}} | }} | ||
Latest revision as of 18:17, 4 June 2020
| Name: | mesenchymal precursor cell - cardiac, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12369 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12369
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12369
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.664 |
| 10 | 10 | 0.818 |
| 100 | 100 | 0.519 |
| 101 | 101 | 0.526 |
| 102 | 102 | 0.0523 |
| 103 | 103 | 0.825 |
| 104 | 104 | 0.913 |
| 105 | 105 | 0.216 |
| 106 | 106 | 0.957 |
| 107 | 107 | 0.618 |
| 108 | 108 | 0.0739 |
| 109 | 109 | 0.464 |
| 11 | 11 | 0.868 |
| 110 | 110 | 0.114 |
| 111 | 111 | 0.273 |
| 112 | 112 | 0.44 |
| 113 | 113 | 0.00123 |
| 114 | 114 | 0.957 |
| 115 | 115 | 0.384 |
| 116 | 116 | 0.0706 |
| 117 | 117 | 0.652 |
| 118 | 118 | 0.413 |
| 119 | 119 | 0.199 |
| 12 | 12 | 0.882 |
| 120 | 120 | 0.228 |
| 121 | 121 | 0.822 |
| 122 | 122 | 0.0283 |
| 123 | 123 | 4.06629e-4 |
| 124 | 124 | 0.172 |
| 125 | 125 | 0.169 |
| 126 | 126 | 0.356 |
| 127 | 127 | 0.47 |
| 128 | 128 | 0.329 |
| 129 | 129 | 0.596 |
| 13 | 13 | 0.941 |
| 130 | 130 | 0.528 |
| 131 | 131 | 0.592 |
| 132 | 132 | 0.646 |
| 133 | 133 | 0.891 |
| 134 | 134 | 0.211 |
| 135 | 135 | 0.412 |
| 136 | 136 | 0.869 |
| 137 | 137 | 0.175 |
| 138 | 138 | 0.586 |
| 139 | 139 | 0.553 |
| 14 | 14 | 0.185 |
| 140 | 140 | 0.837 |
| 141 | 141 | 0.935 |
| 142 | 142 | 0.928 |
| 143 | 143 | 0.857 |
| 144 | 144 | 0.289 |
| 145 | 145 | 0.984 |
| 146 | 146 | 0.726 |
| 147 | 147 | 0.0735 |
| 148 | 148 | 0.862 |
| 149 | 149 | 0.0957 |
| 15 | 15 | 0.739 |
| 150 | 150 | 0.593 |
| 151 | 151 | 0.958 |
| 152 | 152 | 0.349 |
| 153 | 153 | 0.272 |
| 154 | 154 | 0.902 |
| 155 | 155 | 0.0114 |
| 156 | 156 | 0.162 |
| 157 | 157 | 0.887 |
| 158 | 158 | 0.00563 |
| 159 | 159 | 0.176 |
| 16 | 16 | 0.0185 |
| 160 | 160 | 0.933 |
| 161 | 161 | 0.571 |
| 162 | 162 | 0.776 |
| 163 | 163 | 0.257 |
| 164 | 164 | 0.0708 |
| 165 | 165 | 0.664 |
| 166 | 166 | 0.0319 |
| 167 | 167 | 0.322 |
| 168 | 168 | 0.664 |
| 169 | 169 | 0.105 |
| 17 | 17 | 0.786 |
| 18 | 18 | 0.112 |
| 19 | 19 | 0.02 |
| 2 | 2 | 0.238 |
| 20 | 20 | 0.687 |
| 21 | 21 | 0.103 |
| 22 | 22 | 0.212 |
| 23 | 23 | 0.13 |
| 24 | 24 | 0.18 |
| 25 | 25 | 0.0661 |
| 26 | 26 | 0.758 |
| 27 | 27 | 0.863 |
| 28 | 28 | 0.129 |
| 29 | 29 | 0.283 |
| 3 | 3 | 0.779 |
| 30 | 30 | 0.49 |
| 31 | 31 | 0.607 |
| 32 | 32 | 1.18215e-13 |
| 33 | 33 | 0.715 |
| 34 | 34 | 0.764 |
| 35 | 35 | 0.928 |
| 36 | 36 | 0.0135 |
| 37 | 37 | 0.176 |
| 38 | 38 | 0.195 |
| 39 | 39 | 0.18 |
| 4 | 4 | 0.0141 |
| 40 | 40 | 0.0317 |
| 41 | 41 | 0.638 |
| 42 | 42 | 0.164 |
| 43 | 43 | 0.984 |
| 44 | 44 | 0.732 |
| 45 | 45 | 0.885 |
| 46 | 46 | 0.803 |
| 47 | 47 | 0.19 |
| 48 | 48 | 0.487 |
| 49 | 49 | 0.147 |
| 5 | 5 | 0.982 |
| 50 | 50 | 0.811 |
| 51 | 51 | 0.875 |
| 52 | 52 | 0.673 |
| 53 | 53 | 0.0704 |
| 54 | 54 | 0.745 |
| 55 | 55 | 0.106 |
| 56 | 56 | 0.66 |
| 57 | 57 | 0.596 |
| 58 | 58 | 0.133 |
| 59 | 59 | 0.638 |
| 6 | 6 | 0.686 |
| 60 | 60 | 0.698 |
| 61 | 61 | 0.667 |
| 62 | 62 | 0.217 |
| 63 | 63 | 0.759 |
| 64 | 64 | 0.485 |
| 65 | 65 | 0.973 |
| 66 | 66 | 0.123 |
| 67 | 67 | 0.5 |
| 68 | 68 | 0.264 |
| 69 | 69 | 0.672 |
| 7 | 7 | 0.0923 |
| 70 | 70 | 0.928 |
| 71 | 71 | 0.651 |
| 72 | 72 | 0.372 |
| 73 | 73 | 0.164 |
| 74 | 74 | 0.0591 |
| 75 | 75 | 0.701 |
| 76 | 76 | 0.396 |
| 77 | 77 | 0.157 |
| 78 | 78 | 0.0188 |
| 79 | 79 | 0.0237 |
| 8 | 8 | 0.426 |
| 80 | 80 | 0.325 |
| 81 | 81 | 0.604 |
| 82 | 82 | 0.892 |
| 83 | 83 | 0.721 |
| 84 | 84 | 0.978 |
| 85 | 85 | 0.0648 |
| 86 | 86 | 0.256 |
| 87 | 87 | 0.414 |
| 88 | 88 | 0.533 |
| 89 | 89 | 0.117 |
| 9 | 9 | 0.564 |
| 90 | 90 | 0.603 |
| 91 | 91 | 0.865 |
| 92 | 92 | 0.211 |
| 93 | 93 | 0.608 |
| 94 | 94 | 0.886 |
| 95 | 95 | 0.616 |
| 96 | 96 | 0.484 |
| 97 | 97 | 0.302 |
| 98 | 98 | 0.106 |
| 99 | 99 | 0.292 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12369
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000271 human cardiac mesenchymal precursor cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0002494 (cardiocyte)
0000034 (stem cell)
0000569 (cardiac mesenchymal cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0007100 (primary circulatory organ)
0000948 (heart)
0002384 (connective tissue)
0000479 (tissue)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000271 (human cardiac mesenchymal precursor cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000134 (mesenchymal cell)
CL:0000011 (migratory trunk neural crest cell)
CL:0000221 (ectodermal cell)
