FF:10157-103A4: Difference between revisions

Revision as of 14:46, 15 May 2017

Name:	parietal lobe, adult, donor10252
Species:	Human (Homo sapiens)
Library ID:	CNhs12317
Sample type:	tissues
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	parietal lobe
dev stage	NA
sex	female
age	76
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	Peter Heutink
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005804

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12317		CAGE		DRX008701		DRR009573

Accession ID Hg19

Library id		BAM		CTSS
CNhs12317		DRZ000998		DRZ002383

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0.389
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	1.061
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.284
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0.0816
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.15
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0.567
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0816
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.15
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0112
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0.21
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0.308
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0.21
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.0541
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.265
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.905
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.0816
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.0718
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.115
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0.15
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0577
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0816
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.681
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0.0816
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.168
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0.487
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.0316
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0.0816
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0.613
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0.71
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0525
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0501
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0.674
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.0816
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0.308
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0.487
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.506
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0.0816
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.818
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	1.244
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.0816
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0.15
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.21
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0.728
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0.693
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0.15
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0.456
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.0816
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0.693
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12317

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0356
MA0003.1	MA0003.1	0.251
MA0004.1	MA0004.1	0.342
MA0006.1	MA0006.1	0.227
MA0007.1	MA0007.1	0.298
MA0009.1	MA0009.1	0.2
MA0014.1	MA0014.1	0.651
MA0017.1	MA0017.1	6.08332e-4
MA0018.2	MA0018.2	0.441
MA0019.1	MA0019.1	0.693
MA0024.1	MA0024.1	0.89
MA0025.1	MA0025.1	0.407
MA0027.1	MA0027.1	0.567
MA0028.1	MA0028.1	0.0452
MA0029.1	MA0029.1	0.0325
MA0030.1	MA0030.1	0.605
MA0031.1	MA0031.1	0.972
MA0035.2	MA0035.2	0.00473
MA0038.1	MA0038.1	0.47
MA0039.2	MA0039.2	0.105
MA0040.1	MA0040.1	0.834
MA0041.1	MA0041.1	0.437
MA0042.1	MA0042.1	0.973
MA0043.1	MA0043.1	0.981
MA0046.1	MA0046.1	0.00124
MA0047.2	MA0047.2	0.0757
MA0048.1	MA0048.1	0.12
MA0050.1	MA0050.1	0.0219
MA0051.1	MA0051.1	0.0593
MA0052.1	MA0052.1	0.838
MA0055.1	MA0055.1	7.61174e-4
MA0057.1	MA0057.1	0.825
MA0058.1	MA0058.1	0.257
MA0059.1	MA0059.1	0.0752
MA0060.1	MA0060.1	0.99
MA0061.1	MA0061.1	0.00848
MA0062.2	MA0062.2	0.00139
MA0065.2	MA0065.2	1.67388e-4
MA0066.1	MA0066.1	0.0104
MA0067.1	MA0067.1	0.926
MA0068.1	MA0068.1	0.752
MA0069.1	MA0069.1	0.578
MA0070.1	MA0070.1	0.522
MA0071.1	MA0071.1	0.0178
MA0072.1	MA0072.1	0.272
MA0073.1	MA0073.1	0.443
MA0074.1	MA0074.1	0.215
MA0076.1	MA0076.1	0.0769
MA0077.1	MA0077.1	0.288
MA0078.1	MA0078.1	0.723
MA0079.2	MA0079.2	0.755
MA0080.2	MA0080.2	5.66509e-8
MA0081.1	MA0081.1	0.028
MA0083.1	MA0083.1	0.00846
MA0084.1	MA0084.1	0.845
MA0087.1	MA0087.1	0.95
MA0088.1	MA0088.1	0.181
MA0090.1	MA0090.1	0.384
MA0091.1	MA0091.1	0.47
MA0092.1	MA0092.1	0.292
MA0093.1	MA0093.1	0.344
MA0099.2	MA0099.2	7.7007e-20
MA0100.1	MA0100.1	0.55
MA0101.1	MA0101.1	0.00256
MA0102.2	MA0102.2	0.169
MA0103.1	MA0103.1	0.194
MA0104.2	MA0104.2	0.453
MA0105.1	MA0105.1	0.00288
MA0106.1	MA0106.1	0.0406
MA0107.1	MA0107.1	0.00397
MA0108.2	MA0108.2	0.156
MA0111.1	MA0111.1	0.574
MA0112.2	MA0112.2	0.0012
MA0113.1	MA0113.1	0.52
MA0114.1	MA0114.1	8.81304e-4
MA0115.1	MA0115.1	0.296
MA0116.1	MA0116.1	0.00943
MA0117.1	MA0117.1	0.972
MA0119.1	MA0119.1	0.119
MA0122.1	MA0122.1	0.625
MA0124.1	MA0124.1	0.539
MA0125.1	MA0125.1	0.454
MA0131.1	MA0131.1	0.978
MA0135.1	MA0135.1	0.132
MA0136.1	MA0136.1	1.29401e-12
MA0137.2	MA0137.2	0.669
MA0138.2	MA0138.2	0.361
MA0139.1	MA0139.1	0.388
MA0140.1	MA0140.1	6.72451e-4
MA0141.1	MA0141.1	0.00302
MA0142.1	MA0142.1	0.972
MA0143.1	MA0143.1	0.968
MA0144.1	MA0144.1	0.545
MA0145.1	MA0145.1	0.161
MA0146.1	MA0146.1	0.00956
MA0147.1	MA0147.1	0.335
MA0148.1	MA0148.1	0.0892
MA0149.1	MA0149.1	0.0271
MA0150.1	MA0150.1	3.9443e-4
MA0152.1	MA0152.1	0.633
MA0153.1	MA0153.1	0.0592
MA0154.1	MA0154.1	0.0548
MA0155.1	MA0155.1	0.515
MA0156.1	MA0156.1	1.60029e-8
MA0157.1	MA0157.1	0.703
MA0159.1	MA0159.1	0.00524
MA0160.1	MA0160.1	0.00734
MA0162.1	MA0162.1	0.108
MA0163.1	MA0163.1	5.26442e-5
MA0164.1	MA0164.1	0.869
MA0258.1	MA0258.1	0.0106
MA0259.1	MA0259.1	0.91

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12317

Novel motif	Logo	P-value
1	1	0.0594
10	10	0.0553
100	100	0.308
101	101	0.573
102	102	0.866
103	103	0.13
104	104	0.125
105	105	0.127
106	106	0.0433
107	107	0.0941
108	108	0.965
109	109	0.00245
11	11	0.0124
110	110	0.0458
111	111	0.202
112	112	0.49
113	113	0.577
114	114	0.204
115	115	0.942
116	116	0.138
117	117	0.0103
118	118	0.13
119	119	0.225
12	12	0.46
120	120	0.252
121	121	0.276
122	122	0.859
123	123	0.62
124	124	0.0833
125	125	0.213
126	126	0.0281
127	127	0.452
128	128	0.157
129	129	0.599
13	13	5.95659e-4
130	130	0.123
131	131	0.0591
132	132	0.666
133	133	0.0812
134	134	0.675
135	135	0.157
136	136	0.00129
137	137	0.904
138	138	0.968
139	139	0.122
14	14	0.795
140	140	0.57
141	141	0.7
142	142	0.773
143	143	0.0874
144	144	0.939
145	145	0.102
146	146	0.471
147	147	0.728
148	148	0.205
149	149	0.228
15	15	0.112
150	150	0.154
151	151	0.624
152	152	0.0768
153	153	0.814
154	154	0.457
155	155	0.75
156	156	0.452
157	157	0.44
158	158	0.227
159	159	0.0244
16	16	0.0434
160	160	0.236
161	161	0.23
162	162	0.732
163	163	0.685
164	164	0.0479
165	165	0.0452
166	166	0.894
167	167	0.889
168	168	0.426
169	169	0.0104
17	17	0.133
18	18	0.143
19	19	0.186
2	2	0.851
20	20	0.125
21	21	0.0627
22	22	0.177
23	23	0.499
24	24	0.0293
25	25	0.514
26	26	1.51688e-4
27	27	0.812
28	28	0.608
29	29	0.0107
3	3	0.0531
30	30	0.974
31	31	0.856
32	32	0.0266
33	33	0.0477
34	34	0.606
35	35	0.679
36	36	0.168
37	37	0.0391
38	38	0.363
39	39	0.232
4	4	0.783
40	40	0.0239
41	41	0.289
42	42	0.247
43	43	0.12
44	44	0.203
45	45	0.658
46	46	0.0832
47	47	0.0594
48	48	0.049
49	49	0.21
5	5	0.689
50	50	0.333
51	51	0.388
52	52	0.474
53	53	0.911
54	54	0.332
55	55	0.672
56	56	0.436
57	57	0.377
58	58	0.377
59	59	0.0773
6	6	0.933
60	60	0.0749
61	61	0.0523
62	62	0.23
63	63	0.187
64	64	0.22
65	65	0.28
66	66	0.13
67	67	0.442
68	68	0.0948
69	69	0.323
7	7	0.0522
70	70	0.0494
71	71	0.0122
72	72	0.4
73	73	0.0268
74	74	0.781
75	75	0.0421
76	76	0.472
77	77	0.148
78	78	0.00284
79	79	0.402
8	8	0.0551
80	80	0.418
81	81	0.709
82	82	0.634
83	83	0.0323
84	84	0.666
85	85	0.274
86	86	0.235
87	87	7.28769e-5
88	88	0.82
89	89	0.408
9	9	0.329
90	90	0.135
91	91	0.921
92	92	0.613
93	93	0.93
94	94	0.206
95	95	0.0125
96	96	0.838
97	97	0.718
98	98	0.299
99	99	0.51

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12317

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0010034 human parietal lobe - adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0001872 (parietal lobe)
0000956 (cerebral cortex)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0002619 (regional part of cerebral cortex)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
0001950 (neocortex)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010034 (human parietal lobe - adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.38!238.31!TSC22D4;;chr21:34442439..34442455,+!p1@OLIG1!2.24!171.76!OLIG1;;chr9:77112244..77112262,+!p1@RORB!2.16!159.36!RORB;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.15!140.34!PEG3;;chr22:38380543..38380569,-!p1@SOX10!2.09!121.95!SOX10;;chr4:81118647..81118666,+!p1@PRDM8!1.97!119.46!PRDM8;;chr17:53342311..53342400,+!p1@HLF!1.94!97.56!HLF;;chr3:181429704..181429722,+!p1@SOX2!1.93!83.91!SOX2;;chr9:114287433..114287513,+!p1@ZNF483!1.86!178.58!ZNF483;;chr10:64134120..64134183,+!p1@ZNF365!1.82!77.71!ZNF365;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.82!64.49!SMARCE1;;chr17:37764128..37764258,-!p1@NEUROD2!1.80!61.39!NEUROD2;;chr2:162272785..162272836,+!p1@TBR1!1.78!58.70!TBR1;;chr11:113930425..113930471,+!p1@ZBTB16!1.76!79.99!ZBTB16;;chr12:26277817..26277863,-!p2@BHLHE41!1.76!74.82!BHLHE41;;chr14:29235961..29236008,+!p1@FOXG1!1.76!56.22!FOXG1;;chr8:40755333..40755352,-!p1@ZMAT4!1.75!54.98!ZMAT4;;chr11:61520075..61520136,+!p1@C11orf9!1.73!107.27!C11orf9;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.71!50.43!POU3F3;;chr2:2334997..2335053,-!p1@MYT1L!1.70!48.57!MYT1L;;chr5:88178983..88179012,-!p1@MEF2C!1.69!351.16!MEF2C;;chr2:95963052..95963106,+!p1@KCNIP3!1.69!48.16!KCNIP3;;chr8:53322304..53322340,-!p1@ST18!1.69!47.74!ST18;;chr12:106976678..106976708,+!p2@RFX4!1.69!47.74!RFX4;;chr2:145277882..145277967,-!p3@ZEB2!1.64!72.55!ZEB2;;chr21:34398234..34398250,+!p1@OLIG2!1.64!42.16!OLIG2;;chr15:80733570..80733659,+!p2@ARNT2!1.63!41.54!ARNT2;;chrX:25034067..25034088,-!p1@ARX!1.60!38.65!ARX;;chr19:46801639..46801699,+!p1@HIF3A!1.59!38.03!HIF3A;;chr19:13135582..13135600,+!p3@NFIX!1.59!37.82!NFIX;;chr2:166326200..166326216,+!p1@CSRNP3!1.58!53.95!CSRNP3;;chr18:53070846..53070902,-!p6@TCF4!1.58!37.41!TCF4;;chr19:13135386..13135435,+!p4@NFIX!1.57!35.96!NFIX;;chr15:80735246..80735321,+!p3@ARNT2!1.54!33.48!ARNT2;;chr22:41763452..41763466,+!p2@TEF!1.52!32.45!TEF;;chr4:57547454..57547469,-!p1@HOPX!1.52!32.24!HOPX;;chr21:34442540..34442560,+!p2@OLIG1!1.52!32.24!OLIG1;;chr2:60781201..60781258,-!p3@BCL11A!1.51!31.00!BCL11A;;chr3:181429741..181429767,+!p2@SOX2!1.50!30.38!SOX2;;chr14:29236269..29236285,+!p3@FOXG1!1.49!29.97!FOXG1;;chr12:54779511..54779577,-!p5@ZNF385A!1.48!28.94!ZNF385A;;chr12:26277956..26277980,-!p1@BHLHE41!1.47!100.04!BHLHE41;;chr15:80696703..80696754,+!p1@ARNT2!1.45!36.38!ARNT2;;chr10:119302232..119302265,+!p1@EMX2!1.43!26.04!EMX2;;chr8:145560111..145560165,-!p2@SCRT1!1.43!25.84!SCRT1;;chr8:53322347..53322378,-!p2@ST18!1.43!25.63!ST18;;chr7:31380292..31380351,-!p1@NEUROD6!1.42!25.22!NEUROD6;;chr8:145560371..145560449,-!p1@SCRT1!1.41!24.80!SCRT1;;chr11:8102846..8102892,+!p1@TUB!1.40!33.28!TUB;;chr16:1031762..1031781,+!p1@SOX8!1.40!23.98!SOX8;;chr9:126774018..126774055,+!p1@LHX2!1.39!23.56!LHX2;;chr11:125034640..125034655,+!p1@PKNOX2!1.39!23.36!PKNOX2;;chr11:31832862..31832884,-!p2@PAX6!1.39!23.36!PAX6;;chr10:48355030..48355090,+!p1@ZNF488!1.38!29.35!ZNF488;;chr10:134599649..134599653,-!p1@NKX6-2!1.36!21.91!NKX6-2;;chr14:33403881..33403924,+!p1@NPAS3!1.35!21.50!NPAS3;;chr17:7492684..7492778,-!p2@SOX15!1.34!43.20!SOX15;;chr15:31658288..31658338,+!p4@KLF13!1.34!20.88!KLF13;;chr12:103351444..103351461,+!p1@ASCL1!1.32!19.84!ASCL1;;chr14:29234581..29234601,+!p2@FOXG1!1.32!19.84!FOXG1;;chr12:54785074..54785122,-!p2@ZNF385A!1.31!29.56!ZNF385A;;chr6:126112039..126112062,+!p8@NCOA7!1.31!23.15!NCOA7;;chr9:77112225..77112238,+!p2@RORB!1.30!18.81!RORB;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.30!18.81!POU3F3;;chr1:61548069..61548102,+!p3@NFIA!1.29!44.23!NFIA;;chr1:214161272..214161322,+!p1@PROX1!1.29!25.63!PROX1;;chr5:92920256..92920282,+!p7@NR2F1!1.28!21.70!NR2F1;;chr11:113930401..113930422,+!p3@ZBTB16!1.28!18.19!ZBTB16;;chr5:88179017..88179046,-!p2@MEF2C!1.27!69.45!MEF2C;;chr19:57352109..57352153,-!p2@ZIM2!1.27!17.78!ZIM2;;chr2:162272889..162272915,+!p2@TBR1!1.27!17.78!TBR1;;chr11:31832658..31832681,-!p1@PAX6!1.26!17.36!PAX6;;chr19:38085768..38085821,+!p1@ZNF540!1.25!24.80!ZNF540;;chr15:31631789..31631811,+!p13@KLF13!1.25!16.95!KLF13;;chr19:46800289..46800327,+!p2@HIF3A!1.25!16.95!HIF3A;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.24!16.53!ZBED1;;chr2:2330039..2330072,-!p6@MYT1L!1.24!16.53!MYT1L;;chr2:60780607..60780624,-!p2@BCL11A!1.23!48.98!BCL11A;;chr6:15401104..15401166,+!p5@JARID2!1.23!15.91!JARID2;;chr11:47400078..47400106,-!p1@SPI1!1.23!15.91!SPI1;;chr17:38256822..38256851,-!p1@NR1D1!1.22!119.46!NR1D1;;chr14:33403648..33403710,+!p3@NPAS3!1.22!15.71!NPAS3;;chr3:126076242..126076257,-!p1@KLF15!1.21!19.02!KLF15;;chrX:118739835..118739862,-!p1@NKRF!1.21!16.74!NKRF;;chr2:162272716..162272753,+!p3@TBR1!1.21!15.29!TBR1;;chr12:106976774..106976788,+!p1@RFX4!1.21!15.09!RFX4;;chr17:70117153..70117174,+!p1@SOX9!1.20!151.91!SOX9;;chr2:200323414..200323455,-!p1@SATB2!1.20!31.62!SATB2;;chr1:244219775..244219893,+!p2@ZNF238!1.20!20.05!ZNF238;;chrX:85969626..85969664,+!p1@DACH2!1.20!14.67!DACH2;;chr9:3525910..3525955,-!p4@RFX3!1.19!42.78!RFX3;;chr3:141105705..141105770,+!p4@ZBTB38!1.18!17.36!ZBTB38;;chr4:57522166..57522260,-!p2@HOPX!1.18!16.12!HOPX;;chr7:63505799..63505904,+!p1@ZNF727!1.18!14.26!ZNF727;;chr2:2328299..2328363,-!p3@MYT1L!1.18!14.05!MYT1L;;chr16:67198633..67198671,+!p1@HSF4!1.17!13.85!HSF4;;chr9:126773880..126773895,+!p2@LHX2!1.17!13.85!LHX2;;chr9:3525867..3525902,-!p3@RFX3!1.16!46.30!RFX3;;chr16:85932760..85932775,+!p1@IRF8!1.16!13.43!IRF8;;chr2:166428839..166428859,+!p2@CSRNP3!1.16!13.43!CSRNP3;;chr2:95963120..95963136,+!p2@KCNIP3!1.16!13.43!KCNIP3;;chr14:58798013..58798071,+!p2@ARID4A!1.16!13.43!ARID4A;;chr6:143266185..143266238,-!p2@HIVEP2!1.15!17.98!HIVEP2;;chr7:73038839..73038862,-!p1@MLXIPL!1.15!13.23!MLXIPL;;chr11:125034605..125034636,+!p2@PKNOX2!1.15!13.02!PKNOX2;;chr6:19837592..19837621,+!p1@ID4!1.14!77.30!ID4;;chr3:24536253..24536328,-!p1@THRB!1.14!24.39!THRB;;chr11:113930291..113930339,+!p2@ZBTB16!1.14!20.88!ZBTB16;;chr19:38720294..38720348,-!p1@DPF1!1.14!16.12!DPF1;;chrX:70315688..70315709,+!p1@FOXO4!1.13!29.35!FOXO4;;chr6:28321971..28321995,-!p1@ZNF323!1.13!12.61!ZNF323;;chr17:38219209..38219230,+!p1@THRA!1.12!158.12!THRA;;chr1:8585945..8586056,-!p3@RERE!1.11!40.30!RERE;;chr3:141105235..141105307,+!p7@ZBTB38!1.11!11.99!ZBTB38;;chr14:24020938..24020988,-!p1@ZFHX2!1.10!16.53!ZFHX2;;chr8:30890810..30890880,-!p1@PURG!1.10!11.57!PURG;;chr1:151032860..151032918,+!p1@MLLT11!1.09!135.38!MLLT11;;chr12:24715376..24715432,-!p1@SOX5!1.09!14.26!SOX5;;chr14:33408072..33408114,+!p2@NPAS3!1.08!13.02!NPAS3;;chr20:42544782..42544828,+!p4@TOX2!1.08!11.16!TOX2;;chr3:21792682..21792720,-!p1@ZNF385D!1.08!11.16!ZNF385D;;chr5:178368186..178368238,+!p1@ZNF454!1.07!19.22!ZNF454;;chr18:53068911..53068935,-!p4@TCF4!1.07!12.19!TCF4;;chr16:67198683..67198698,+!p2@HSF4!1.07!10.75!HSF4;;chr1:40105299..40105326,-!p1@HEYL!1.07!10.75!HEYL;;chr10:38265517..38265591,-!p1@ZNF25!1.06!41.13!ZNF25;;chr19:53636125..53636178,-!p1@ZNF415!1.06!29.97!ZNF415;;chr5:88179518..88179569,-!p5@MEF2C!1.06!13.85!MEF2C;;chr2:180726291..180726311,-!p1@ZNF385B!1.06!10.54!ZNF385B;;chr3:187463179..187463201,-!p2@BCL6!1.05!43.20!BCL6;;chr15:61521417..61521460,-!p2@RORA!1.05!23.15!RORA;;chr13:46549911..46549956,-!p3@ZC3H13!1.05!14.67!ZC3H13;;chr10:64134045..64134083,+!p3@ZNF365!1.05!10.33!ZNF365;;chr19:7580549..7580596,+!p3@ZNF358!1.05!10.33!ZNF358;;chr2:162273241..162273253,+!p4@TBR1!1.05!10.33!TBR1;;chr16:67197654..67197716,+!p3@HSF4!1.05!10.13!HSF4;;chr18:52989031..52989079,-!p2@TCF4!1.04!23.77!TCF4;;chr7:64023410..64023428,-!p2@ZNF680!1.04!15.71!ZNF680;;chr19:13135566..13135577,+!p9@NFIX!1.04!9.92!NFIX;;chr12:24102576..24102623,-!p2@SOX5!1.04!9.92!SOX5;;chr9:126774058..126774081,+!p3@LHX2!1.04!9.92!LHX2;;chr2:113057415..113057477,+!p3@ZC3H6!1.03!12.61!ZC3H6;;chr11:31832807..31832823,-!p4@PAX6!1.03!9.71!PAX6;;chr21:39870339..39870443,-!p1@ERG!1.03!9.71!ERG;;chr14:73360799..73360817,-!p1@DPF3!1.02!33.28!DPF3;;chrX:118739782..118739829,-!p2@NKRF!1.02!9.51!NKRF;;chr16:67197776..67197831,+!p4@HSF4!1.02!9.51!HSF4;;chr5:71803177..71803255,-!p1@ZNF366!1.02!9.51!ZNF366;;chr3:18466787..18466839,-!p1@SATB1!1.01!41.75!SATB1;;chr8:28347737..28347785,-!p1@FBXO16,p2@ZNF395!1.01!19.84!ZNF395;;chr5:138609489..138609542,+!p8@MATR3!1.01!9.30!MATR3;;chr9:14314946..14314983,-!p8@NFIB!1.01!9.30!NFIB;;chr5:139487608..139487663,+!p3@PURA!1.00!19.43!PURA;;chr20:51588873..51588953,+!p1@TSHZ2!1.00!11.99!TSHZ2;;chr11:125034586..125034604,+!p3@PKNOX2!1.00!9.09!PKNOX2;;chr16:67197952..67197990,+!p5@HSF4!1.00!9.09!HSF4;;chr3:24536332..24536358,-!p2@THRB!1.00!8.89!THRB;;chr2:214016314..214016343,-!p2@IKZF2!0.99!14.88!IKZF2;;chr2:162273254..162273267,+!p6@TBR1!0.99!8.68!TBR1;;chr8:10588010..10588030,-!p1@SOX7!0.99!8.68!SOX7;;chr3:114819124..114819200,-!p3@ZBTB20!0.98!20.26!ZBTB20;;chr2:2335070..2335098,-!p4@MYT1L!0.98!8.47!MYT1L;;chr3:114343039..114343085,-!p8@ZBTB20!0.98!8.47!ZBTB20;;chr4:57547751..57547764,-!p6@HOPX!0.98!8.47!HOPX;;chr10:31610110..31610159,+!p2@ZEB1!0.98!8.47!ZEB1;;chr12:106976656..106976672,+!p4@RFX4!0.98!8.47!RFX4;;chr15:31631813..31631825,+!p17@KLF13!0.98!8.47!KLF13;;chr18:53070913..53070933,-!p16@TCF4!0.98!8.47!TCF4;;chr12:26277929..26277955,-!p3@BHLHE41!0.97!11.99!BHLHE41;;chr3:18466660..18466676,-!p5@SATB1!0.97!9.92!SATB1;;chr18:45935720..45935772,-!p1@ZBTB7C!0.97!8.27!ZBTB7C;;chr8:93074803..93074845,-!p1@RUNX1T1!0.97!8.27!RUNX1T1;;chr6:126112074..126112144,+!p1@NCOA7!0.96!112.44!NCOA7;;chr13:45151434..45151507,-!p3@TSC22D1!0.96!46.30!TSC22D1;;chr6:28321827..28321856,-!p5@ZNF323!0.96!8.06!ZNF323;;chr2:166428861..166428883,+!p3@CSRNP3!0.96!8.06!CSRNP3;;chr2:42721205..42721307,+!p4@MTA3!0.96!8.06!MTA3;;chr2:73520667..73520683,-!p1@EGR4!0.96!8.06!EGR4;;chr7:64023441..64023462,-!p1@ZNF680!0.95!64.90!ZNF680;;chr5:172483347..172483407,+!p1@C5orf41!0.95!61.59!CREBRF;;chr16:79634624..79634642,-!p1@MAF!0.95!32.24!MAF;;chr20:3388541..3388575,-!p2@C20orf194!0.95!31.62!C20orf194;;chr19:4065848..4065909,-!p4@ZBTB7A!0.95!15.71!ZBTB7A;;chr10:64133862..64133884,+!p4@ZNF365!0.95!7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chr12:103352326..103352351,+!p3@ASCL1!0.46!1.86!ASCL1;;chr12:104531768..104531782,-!p7@NFYB!0.46!1.86!NFYB;;chr12:26276197..26276214,-!p8@BHLHE41!0.46!1.86!BHLHE41;;chr13:100634130..100634143,+!p3@ZIC2!0.46!1.86!ZIC2;;chr13:72440434..72440479,-!p6@DACH1!0.46!1.86!DACH1;;chr19:38714847..38714878,-!p3@DPF1!0.46!1.86!DPF1;;chr19:49140692..49140709,-!p5@DBP!0.46!1.86!DBP;;chr1:61542891..61542920,+!p12@NFIA!0.46!1.86!NFIA;;chr1:61542922..61542955,+!p10@NFIA!0.46!1.86!NFIA;;chr20:2673369..2673382,+!p2@EBF4!0.46!1.86!EBF4;;chr15:31684663..31684717,+!p10@KLF13!0.46!1.86!KLF13;;chr15:57511589..57511608,+!p4@TCF12!0.46!1.86!TCF12;;chr15:77197723..77197734,-!p4@SCAPER!0.46!1.86!SCAPER;;chr15:90294087..90294115,-!p1@MESP1!0.46!1.86!MESP1;;chr16:4323301..4323317,-!p7@TFAP4!0.46!1.86!TFAP4;;chr16:69681215..69681227,+!p17@NFAT5!0.46!1.86!NFAT5;;chr17:7382810..7382822,-!p12@ZBTB4!0.46!1.86!ZBTB4;;chr18:53089493..53089517,-!p15@TCF4!0.46!1.86!TCF4;;chr22:42739839..42739867,-!p1@ENST00000515426!0.46!1.86!TCF20;;chr2:113057489..113057500,+!p7@ZC3H6!0.46!1.86!ZC3H6;;chr2:145277792..145277808,-!p15@ZEB2!0.46!1.86!ZEB2;;chr2:182545296..182545307,-!p3@NEUROD1!0.46!1.86!NEUROD1;;chr2:200335983..200335994,-!p16@SATB2!0.46!1.86!SATB2;;chr3:168865250..168865272,-!p5@MECOM!0.46!1.86!MECOM;;chr9:14314066..14314075,-!p11@NFIB!0.46!1.86!NFIB;;chrX:128657363..128657372,-!p3@SMARCA1!0.46!1.86!SMARCA1;;chrX:47225841..47225861,+!p@chrX:47225841..47225861,+!0.46!1.86!ZNF157;;chrX:136648279..136648295,+!p1@ZIC3!0.46!1.86!ZIC3;;chr5:139494638..139494649,+!p16@PURA!0.46!1.86!PURA;;chr5:92919452..92919496,+!p11@NR2F1!0.46!1.86!NR2F1;;chr6:126111856..126111865,+!p15@NCOA7!0.46!1.86!NCOA7;;chr6:99282570..99282591,+!p4@POU3F2!0.46!1.86!POU3F2;;chr8:106330848..106330859,+!p5@ZFPM2!0.46!1.86!ZFPM2;;chr8:22550509..22550526,-!p6@EGR3!0.46!1.86!EGR3;;chr8:53322411..53322422,-!p6@ST18!0.46!1.86!ST18;;chr1:153895377..153895465,-!p1@GATAD2B!0.45!73.37!GATAD2B;;chr18:72922777..72922808,+!p2@TSHZ1!0.45!11.57!TSHZ1;;chr10:44070016..44070069,-!p1@ZNF239!0.45!7.03!ZNF239;;chrX:24167548..24167617,+!p2@ZFX!0.45!7.03!ZFX;;chrX:106960221..106960236,-!p3@TSC22D3!0.45!6.41!TSC22D3;;chr19:37958318..37958365,-!p2@ZNF569!0.45!6.20!ZNF569;;chr9:14082760..14082775,-!p6@NFIB!0.45!3.51!NFIB;;chr6:1312325..1312340,+!p1@FOXQ1!0.45!3.51!FOXQ1;;chr8:73921067..73921078,+!p3@TERF1!0.45!3.31!TERF1;;chr9:32550965..32551031,-!p4@TOPORS!0.45!3.31!TOPORS;;chr12:432372..432377,-!p3@KDM5A!0.45!3.31!KDM5A;;chr13:46543859..46543881,-!p10@ZC3H13!0.45!2.48!ZC3H13;;chrX:70585978..70586012,+!p3@TAF1!0.45!2.48!TAF1;;chr2:176033054..176033065,-!p4@ATF2!0.45!2.27!ATF2;;chr4:26321435..26321454,+!p12@RBPJ!0.45!2.27!RBPJ;;chr3:178789566..178789620,-!p1@ZMAT3!0.44!44.23!ZMAT3;;chr7:152133059..152133102,-!p1@MLL3!0.44!39.68!MLL3;;chr11:10879572..10879591,-!p2@ZBED5!0.44!33.07!ZBED5;;chr14:64970494..64970578,-!p1@ZBTB25!0.44!24.60!ZBTB25;;chr19:52901094..52901134,+!p1@ZNF528!0.44!16.12!ZNF528;;chr1:227751231..227751273,+!p1@ZNF678!0.44!15.29!ZNF678;;chr19:58258167..58258201,+!p1@ZNF776!0.44!14.47!ZNF776;;chr7:99070499..99070523,+!p1@ZNF789!0.44!12.81!ZNF789;;chr1:156470515..156470542,-!p2@MEF2D!0.44!12.40!MEF2D;;chr17:7382856..7382889,-!p3@ZBTB4!0.44!9.51!ZBTB4;;chr19:53238260..53238312,-!p1@ZNF611!0.44!8.27!ZNF611;;chr8:116681221..116681236,-!p3@TRPS1!0.44!6.82!TRPS1;;chr19:52408285..52408310,-!p3@ZNF649!0.44!5.17!ZNF649;;chr10:43932296..43932360,+!p1@ZNF487P!0.44!4.55!ZNF487P;;chr17:2304226..2304239,-!p3@MNT!0.44!4.34!MNT;;chr15:37391271..37391376,-!p5@MEIS2!0.44!3.93!MEIS2;;chr3:114866124..114866149,-!p5@ZBTB20!0.44!3.51!ZBTB20;;chr2:145282041..145282092,-!p8@ZEB2!0.44!3.10!ZEB2;;chr11:47270477..47270494,+!p4@NR1H3!0.44!2.89!NR1H3;;chr12:49445907..49445923,-!p2@MLL2!0.44!2.89!MLL2;;
+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000956;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001872;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001890;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003528
 |ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
 |fonse_cell_line=

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FF:10157-103A4: Difference between revisions

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Revision as of 14:46, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0